RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PLEKHH2Q8IVE3 1493 aa2.65□□□□□ -1.98
HMGN1P28-201ENST00000521340 RALGAPA1Q6GYQ0 2036 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 ABCC2Q92887 1545 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 A0A1W2PPE3 182 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 SAGE2PA6NJ88 616 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 MSH4O15457 936 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 GALR3O60755 368 aaPredicted RBP2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 B4GALT2O60909 372 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 SCRG1O75711 98 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 GJB5O95377 273 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 SLC2A10O95528 541 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 PIGRP01833 764 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 H2BFMP0C1H6 154 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZNF883P0CG24 379 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 HSD17B1P14061 328 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 IDSP22304 550 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 PAX2Q02962 417 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 RGS1Q08116 209 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 IDI1Q13907 227 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 EXOC3L2Q2M3D2 409 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 C1orf220Q5T0J3 134 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZSCAN25Q6NSZ9 544 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 FAHD2BQ6P2I3 314 aaPredicted RBP2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZNF600Q6ZNG1 722 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 GCNT7Q6ZNI0 430 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 IFNEQ86WN2 208 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 C17orf82Q86X59 251 aaPredicted RBP2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 CATSPER3Q86XQ3 398 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 ARL14Q8N4G2 192 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 BHLHE23Q8NDY6 225 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 AENQ8WTP8 325 aaKnown RBP2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 NR4A3Q92570 626 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZNF689Q96CS4 500 aaPredicted RBP2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 FAHD2AQ96GK7 314 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 TMEM80Q96HE8 168 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 CELF6Q96J87 481 aaKnown RBP2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 AGAP3Q96P47 875 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 NPAS2Q99743 824 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 VGLL1Q99990 258 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 DUSP16Q9BY84 665 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 PARD6BQ9BYG5 372 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 NFKBIZQ9BYH8 718 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 LRRN3Q9H3W5 708 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 VCPKMTQ9H867 229 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 CLEC5AQ9NY25 188 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 ARMCX1Q9P291 453 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 ONECUT1Q9UBC0 465 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 LCMT1Q9UIC8 334 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 BLMP54132 1417 aaPredicted RBP2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 SMG6Q86US8 1419 aaKnown RBP2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 PRG4Q92954 1404 aaPredicted RBP2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZBED9Q6R2W3 1325 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 FANCIQ9NVI1 1328 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 A2MP01023 1474 aa2.65□□□□□ -1.99
HMGN1P28-201ENST00000521340 MAP3K4Q9Y6R4 1608 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 LRPPRCP42704 1394 aaKnown RBP2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 USP47Q96K76 1375 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 IGHV2-70DA0A0C4DH43 119 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 A0A0U1RQS6 177 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 A0A1B0GU03 582 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 LRP5LA4QPB2 252 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZNF705EA8MWA4 302 aaPredicted RBP2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZNF487B1APH4 448 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 H3BMQ9 156 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 MPHOSPH10O00566 681 aaKnown RBP2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 KBTBD11O94819 623 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 IGHV3-13P01766 116 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 SERPINB2P05120 415 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZNF853P0CG23 659 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 PNMTP11086 282 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 NCK1P16333 377 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 OXTRP30559 389 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 HMGCLP35914 325 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 ELK3P41970 407 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 ARHGDIBP52566 201 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 AP3M2P53677 418 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 OSTNP61366 133 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 VLDLRP98155 873 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 BEX3Q00994 111 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 PEX6Q13608 980 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 DDX39BQ13838 428 aaKnown RBP2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 NDUFA9Q16795 377 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 PPP1R3AQ16821 1122 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 MICAQ29983 383 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 SLC25A52Q3SY17 297 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 TP53I3Q53FA7 332 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 BOLA3Q53S33 107 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 GFI1BQ5VTD9 330 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZNF772Q68DY9 489 aaPredicted RBP2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 ATL3Q6DD88 541 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 OR4F3Q6IEY1 312 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 FAM199XQ6PEV8 388 aaPredicted RBP2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 TMUB2Q71RG4 321 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 NLRP9Q7RTR0 991 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 EFL1Q7Z2Z2 1120 aaKnown RBP2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 TRIM69Q86WT6 500 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 CLEC4FQ8N1N0 589 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 KIR3DL3Q8N743 410 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZSCAN4Q8NAM6 433 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms