RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 ESPNB1AK53 854 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 ETV2O00321 342 aaPredicted RBP17.47■□□□□ 0.39
PABPC1-215ENST00000520804 SMAD7O15105 426 aaKnown RBP17.47■□□□□ 0.39
PABPC1-215ENST00000520804 CNOT4O95628 575 aaKnown RBP17.47■□□□□ 0.39
PABPC1-215ENST00000520804 YES1P07947 543 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 UBL4AP11441 157 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 ENPP1P22413 925 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 SOAT1P35610 550 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 ETV4P43268 484 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 CLDN8P56748 225 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 EMX2Q04743 252 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 MAD2L1Q13257 205 aaPredicted RBP17.47■□□□□ 0.39
PABPC1-215ENST00000520804 CBFBQ13951 182 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 QPRTQ15274 297 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 TSC22D1Q15714 1073 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 SFRP5Q5T4F7 317 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 SLC43A2Q8N370 569 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 TMCO5AQ8N6Q1 288 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 RFWD2Q8NHY2 731 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 AKAP1Q92667 903 aaKnown RBP eCLIP17.47■□□□□ 0.399e-8■■□□□ 13.6
PABPC1-215ENST00000520804 TACO1Q9BSH4 297 aaKnown RBP17.47■□□□□ 0.39
PABPC1-215ENST00000520804 NMUR2Q9GZQ4 415 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 SERHL2Q9H4I8 314 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 CXorf56Q9H5V9 222 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 ASIC5Q9NY37 505 aa17.47■□□□□ 0.39
PABPC1-215ENST00000520804 ABCA2Q9BZC7 2435 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 SERINC4A6NH21 518 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 DUXAA6NLW8 204 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 TYROBPO43914 113 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 MATN1P21941 496 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 SLC7A1P30825 629 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 RAC3P60763 192 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 RPS26P62854 115 aaKnown RBP17.46■□□□□ 0.39
PABPC1-215ENST00000520804 PGS1Q32NB8 556 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 PDZK1Q5T2W1 519 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 ALKBH2Q6NS38 261 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 C6orf120Q7Z4R8 191 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 CLECL1Q8IZS7 167 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 RAB3IL1Q8TBN0 382 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 BCO1Q9HAY6 547 aa17.46■□□□□ 0.39
PABPC1-215ENST00000520804 NOP53Q9NZM5 478 aaKnown RBP17.46■□□□□ 0.39
PABPC1-215ENST00000520804 ROS1P08922 2347 aa17.46■□□□□ 0.38
PABPC1-215ENST00000520804 IGHV3-15A0A0B4J1V0 119 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 A0A1W2PNR3 127 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 DNAJA2O60884 412 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 AK1P00568 194 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 IL32P24001 234 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 CCR4P51679 360 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 P2RY6Q15077 328 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 GPR68Q15743 365 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 TAB1Q15750 504 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 ZNF141Q15928 474 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 SMU1Q2TAY7 513 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 ADAM5Q6NVV9 412 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 NUDCD3Q8IVD9 361 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 CLEC4FQ8N1N0 589 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 AENQ8WTP8 325 aaKnown RBP17.45■□□□□ 0.38
PABPC1-215ENST00000520804 ZIM3Q96PE6 472 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 PSD2Q9BQI7 771 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 LAT2Q9GZY6 243 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 KLHL9Q9P2J3 617 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 KCNE5Q9UJ90 142 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 ING1Q9UK53 422 aaPredicted RBP17.45■□□□□ 0.38
PABPC1-215ENST00000520804 RNF115Q9Y4L5 304 aa17.45■□□□□ 0.38
PABPC1-215ENST00000520804 FN1P02751 2386 aaKnown RBP17.45■□□□□ 0.38
PABPC1-215ENST00000520804 RNF103-CHMP3A0A140T963 221 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 ZNF814B7Z6K7 855 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 RNASET2O00584 256 aaKnown RBP17.44■□□□□ 0.38
PABPC1-215ENST00000520804 FCMRO60667 390 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 STX11O75558 287 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 ADAP00813 363 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 SKP2Q13309 424 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 ARHGAP11BQ3KRB8 267 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 TIGD2Q4W5G0 525 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 NCMAPQ5T1S8 102 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 OR4F3Q6IEY1 312 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 C3orf33Q6P1S2 294 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 LILRB1Q8NHL6 650 aaPredicted RBP17.44■□□□□ 0.38
PABPC1-215ENST00000520804 HSD17B8Q92506 261 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 KISS1RQ969F8 398 aaPredicted RBP17.44■□□□□ 0.38
PABPC1-215ENST00000520804 ARL8AQ96BM9 186 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 SLC35G5Q96KT7 338 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 USB1Q9BQ65 265 aaKnown RBP17.44■□□□□ 0.38
PABPC1-215ENST00000520804 THUMPD3Q9BV44 507 aaKnown RBP17.44■□□□□ 0.38
PABPC1-215ENST00000520804 NGBQ9NPG2 151 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 PRR14LQ5THK1 2151 aa17.44■□□□□ 0.38
PABPC1-215ENST00000520804 CENPVL1A0A0U1RR11 272 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 ITM2AO43736 263 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 UGT2B17O75795 530 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 CYP7B1O75881 506 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 H6PDO95479 791 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 ATP5J2P56134 94 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 RPS4XP62701 263 aaKnown RBP17.43■□□□□ 0.38
PABPC1-215ENST00000520804 ITGADQ13349 1161 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 PDCD2Q16342 344 aaPredicted RBP17.43■□□□□ 0.38
PABPC1-215ENST00000520804 EMBQ6PCB8 327 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 OLIG3Q7RTU3 272 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 OR8J2Q8NGG1 315 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 ST8SIA1Q92185 356 aa17.43■□□□□ 0.38
PABPC1-215ENST00000520804 PKNOX2Q96KN3 472 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms