RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 UNQ9370/PRO34162Q6UXP9 181 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 PAQR9Q6ZVX9 377 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 CYS1Q717R9 158 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 RNF182Q8N6D2 247 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 SLC22A8Q8TCC7 542 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 TMEM158Q8WZ71 300 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 TMEM186Q96B77 213 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 RASL11BQ9BPW5 248 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 TMEM121Q9BTD3 319 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 RNF126Q9BV68 326 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 RAB17Q9H0T7 212 aa2.33□□□□□ -2.04
SKP1-207ENST00000520417 CNOT2Q9NZN8 540 aaKnown RBP2.33□□□□□ -2.04
SKP1-207ENST00000520417 MTRF1LQ9UGC7 380 aaKnown RBP2.33□□□□□ -2.04
SKP1-207ENST00000520417 HOOK1Q9UJC3 728 aaKnown RBP2.33□□□□□ -2.04
SKP1-207ENST00000520417 RASGRF2O14827 1237 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 HCN1O60741 890 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 SEC22BO75396 215 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 KIAA0754O94854 1291 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 TGFAP01135 160 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 GIPP09681 153 aaPredicted RBP2.32□□□□□ -2.04
SKP1-207ENST00000520417 ADRB3P13945 408 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 GAP43P17677 238 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 SERPINA2P20848 420 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 ATP5A1P25705 553 aaKnown RBP2.32□□□□□ -2.04
SKP1-207ENST00000520417 SH3BGRP55822 239 aaPredicted RBP2.32□□□□□ -2.04
SKP1-207ENST00000520417 GABPB1Q06547 395 aaPredicted RBP2.32□□□□□ -2.04
SKP1-207ENST00000520417 PDIA5Q14554 519 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 ZSWIM7Q19AV6 140 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 PVRIGQ6DKI7 326 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 PLBD1Q6P4A8 553 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 VPS36Q86VN1 386 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 ELMOD2Q8IZ81 293 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 OR2L8Q8NGY9 312 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 ZNF596Q8TC21 504 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 SDSLQ96GA7 329 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 FAM210BQ96KR6 192 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 FAM111AQ96PZ2 611 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 HDHD3Q9BSH5 251 aaPredicted RBP2.32□□□□□ -2.04
SKP1-207ENST00000520417 WRAP53Q9BUR4 548 aaKnown RBP2.32□□□□□ -2.04
SKP1-207ENST00000520417 COMMD4Q9H0A8 199 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 POLR3FQ9H1D9 316 aaPredicted RBP2.32□□□□□ -2.04
SKP1-207ENST00000520417 ROPN1Q9HAT0 212 aaPredicted RBP2.32□□□□□ -2.04
SKP1-207ENST00000520417 NUFIP1Q9UHK0 495 aaKnown RBP2.32□□□□□ -2.04
SKP1-207ENST00000520417 CRLS1Q9UJA2 301 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 TBX21Q9UL17 535 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 ODF2LQ9ULJ1 636 aa2.32□□□□□ -2.04
SKP1-207ENST00000520417 LOC100131303A0A0U1RQF7 123 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 C11orf94C9JXX5 98 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 OR10H3O60404 316 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 PLEKP08567 350 aaPredicted RBP2.31□□□□□ -2.04
SKP1-207ENST00000520417 RRASP10301 218 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 BCKDHAP12694 445 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 H2AFXP16104 143 aaPredicted RBP2.31□□□□□ -2.04
SKP1-207ENST00000520417 PTPN6P29350 595 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 ATXN3P54252 364 aaPredicted RBP2.31□□□□□ -2.04
SKP1-207ENST00000520417 GMFBP60983 142 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 BDH1Q02338 343 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 MOBPQ13875 183 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 TMEM52BQ4KMG9 183 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 CNSTQ6PJW8 725 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 IGFL1Q6UW32 110 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 RBM43Q6ZSC3 357 aaKnown RBP2.31□□□□□ -2.04
SKP1-207ENST00000520417 HDDC3Q8N4P3 179 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 RNF148Q8N7C7 305 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 DUSP18Q8NEJ0 188 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 OR56B1Q8NGI3 324 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 DQX1Q8TE96 717 aaKnown RBP2.31□□□□□ -2.04
SKP1-207ENST00000520417 NCLNQ969V3 563 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 SAMD8Q96LT4 415 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 KRT23Q9C075 422 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 C1orf21Q9H246 121 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 RPAP3Q9H6T3 665 aaPredicted RBP2.31□□□□□ -2.04
SKP1-207ENST00000520417 TRPV5Q9NQA5 729 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 YAE1D1Q9NRH1 226 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 AIG1Q9NVV5 245 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 NINJ2Q9NZG7 142 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 P2RX2Q9UBL9 471 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 EIF3LQ9Y262 564 aaKnown RBP2.31□□□□□ -2.04
SKP1-207ENST00000520417 ZNF835Q9Y2P0 537 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 UGT2A1Q9Y4X1 527 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 USP16Q9Y5T5 823 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 COL1A2P08123 1366 aa2.31□□□□□ -2.04
SKP1-207ENST00000520417 ZNF705EA8MWA4 302 aaPredicted RBP2.3□□□□□ -2.04
SKP1-207ENST00000520417 STX11O75558 287 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 NDUFA7O95182 113 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 IGLV3-19P01714 112 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 ANXA4P09525 319 aaPredicted RBP2.3□□□□□ -2.04
SKP1-207ENST00000520417 ARF4P18085 180 aaPredicted RBP2.3□□□□□ -2.04
SKP1-207ENST00000520417 XRCC1P18887 633 aaPredicted RBP2.3□□□□□ -2.04
SKP1-207ENST00000520417 IL10P22301 178 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 MAPK3P27361 379 aaPredicted RBP2.3□□□□□ -2.04
SKP1-207ENST00000520417 ASMTP46597 345 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 RABIFP47224 123 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 STARD6P59095 220 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 OSTNP61366 133 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 CDC37Q16543 378 aaPredicted RBP2.3□□□□□ -2.04
SKP1-207ENST00000520417 LINC00483Q53H64 154 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 RAET1GQ6H3X3 334 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 LPCAT2Q7L5N7 544 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 TTC5Q8N0Z6 440 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms