RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-221ENST00000520265 KCNN3Q9UGI6 736 aa12.74□□□□□ -0.37
VEGFA-221ENST00000520265 KCNE5Q9UJ90 142 aa12.74□□□□□ -0.37
VEGFA-221ENST00000520265 FOXD3Q9UJU5 478 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-221ENST00000520265 ICAM5Q9UMF0 924 aa12.74□□□□□ -0.37
VEGFA-221ENST00000520265 LIPT1Q9Y234 373 aa12.74□□□□□ -0.37
VEGFA-221ENST00000520265 SLC35A3Q9Y2D2 325 aa12.74□□□□□ -0.37
VEGFA-221ENST00000520265 EMC9Q9Y3B6 208 aa12.74□□□□□ -0.37
VEGFA-221ENST00000520265 ZNF175Q9Y473 711 aa12.74□□□□□ -0.37
VEGFA-221ENST00000520265 C7orf72A4D263 438 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 CHRM4P08173 479 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 TFPIP10646 304 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 IL7RP16871 459 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 PRKCAP17252 672 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 IGFBP2P18065 325 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 SLC6A8P48029 635 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 CARD18P57730 90 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 TXNL4AP83876 142 aaKnown RBP12.73□□□□□ -0.37
VEGFA-221ENST00000520265 SELENBP1Q13228 472 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 FGFBP1Q14512 234 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 EXOC3L2Q2M3D2 409 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 TMEM176BQ3YBM2 270 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-221ENST00000520265 ADGRE4PQ86SQ3 457 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 PEX5LQ8IYB4 626 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 GPR119Q8TDV5 335 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 ZFP90Q8TF47 636 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 TMEM234Q8WY98 164 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 OSTF1Q92882 214 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 C14orf79Q96F83 325 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 MRGPRX4Q96LA9 322 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 LURAP1Q96LR2 239 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 TRNT1Q96Q11 434 aaKnown RBP12.73□□□□□ -0.37
VEGFA-221ENST00000520265 UCN2Q96RP3 112 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 LAT2Q9GZY6 243 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 OPN3Q9H1Y3 402 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-221ENST00000520265 TIGARQ9NQ88 270 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 SERINC1Q9NRX5 453 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 PAQR5Q9NXK6 330 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-221ENST00000520265 CRIM1Q9NZV1 1036 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 ITGB1BP2Q9UKP3 347 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 PROCRQ9UNN8 238 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 TRIM33Q9UPN9 1127 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 ADGRG4Q8IZF6 3080 aa12.73□□□□□ -0.37
VEGFA-221ENST00000520265 A0A0J9YW62 118 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 CLDN24A6NM45 220 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 C5orf58C9J3I9 102 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 SYT5O00445 386 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 AQP8O94778 261 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 VIMP08670 466 aaKnown RBP12.72□□□□□ -0.37
VEGFA-221ENST00000520265 TROVE2P10155 538 aaKnown RBP eCLIP12.72□□□□□ -0.37
VEGFA-221ENST00000520265 CCNA2P20248 432 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 ELK4P28324 431 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 SHC1P29353 583 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 PEX19P40855 299 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 EEF1A1P68104 462 aaKnown RBP12.72□□□□□ -0.37
VEGFA-221ENST00000520265 RPS26P11Q5JNZ5 115 aaPredicted RBP12.72□□□□□ -0.37
VEGFA-221ENST00000520265 EEF1A1P5Q5VTE0 462 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 LINC01560Q8TB33 94 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 ROBO4Q8WZ75 1007 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 DNAJA3Q96EY1 480 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 OR5B2Q96R09 309 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 RAD21L1Q9H4I0 556 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 RNF122Q9H9V4 155 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 MCCC2Q9HCC0 563 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 CALML5Q9NZT1 146 aa12.72□□□□□ -0.37
VEGFA-221ENST00000520265 MED12LQ86YW9 2145 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 A0A096LPI6 279 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 A0A1W2PNR3 127 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 PRAMEF27A3QJZ7 478 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 CLIC1O00299 241 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 EDF1O60869 148 aaKnown RBP12.71□□□□□ -0.37
VEGFA-221ENST00000520265 TNFSF13O75888 250 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 CRHP06850 196 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 UQCRBP14927 111 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 PSMA4P25789 261 aaKnown RBP12.71□□□□□ -0.37
VEGFA-221ENST00000520265 ADH6P28332 368 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 CRISP3P54108 245 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 SESN3P58005 492 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 KRTAP10-9P60411 292 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 KCNJ10P78508 379 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 C3orf33Q6P1S2 294 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 BTLAQ7Z6A9 289 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 ST8SIA1Q92185 356 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 GTF2H4Q92759 462 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 CPNE4Q96A23 557 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-221ENST00000520265 ZG16BQ96DA0 208 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 GPATCH1Q9BRR8 931 aaKnown RBP12.71□□□□□ -0.37
VEGFA-221ENST00000520265 SLC38A1Q9H2H9 487 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 RABEP2Q9H5N1 569 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 C12orf49Q9H741 205 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 ZNF446Q9NWS9 450 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 PCDHB14Q9Y5E9 798 aa12.71□□□□□ -0.37
VEGFA-221ENST00000520265 IGHV3-15A0A0B4J1V0 119 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 MSTNO14793 375 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 BCAS1O75363 584 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 ZCCHC18P0CG32 403 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 POU2F1P14859 743 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms