RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 FAM120BQ96EK7 910 aaKnown RBP6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ZNF385AQ96PM9 386 aaKnown RBP6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ATOH8Q96SQ7 321 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 AIF1LQ9BQI0 150 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 DRC3Q9H069 523 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 SLC26A1Q9H2B4 701 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 PIGMQ9H3S5 423 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ANKZF1Q9H8Y5 726 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 WDR54Q9H977 334 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 PELI2Q9HAT8 420 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 NUDT4Q9NZJ9 180 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 TRPC4Q9UBN4 977 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ZNF282Q9UDV7 671 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-208ENST00000520228 NXT1Q9UKK6 140 aaKnown RBP6.34□□□□□ -1.39
SDCBP-208ENST00000520228 KALRNO60229 2985 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 ZFC3H1O60293 1989 aaKnown RBP6.33□□□□□ -1.4
SDCBP-208ENST00000520228 CFAP46Q8IYW2 2715 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 A0A0A6YYC8 382 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-208ENST00000520228 IQANK1A0A1B0GTG1 560 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 VSTM2BA6NLU5 285 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 ZNF587BE7ETH6 402 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 I3L1I5 382 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-208ENST00000520228 MAP2K7O14733 419 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 CLGNO14967 610 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 NDUFS4O43181 175 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 UMODP07911 640 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 RBP1P09455 135 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 SLC35G6P0C7Q6 338 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 GFAPP14136 432 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 ALOX12P18054 663 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 S1PR1P21453 382 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 GCAP28676 217 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 AHRP35869 848 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 MAGEA12P43365 314 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 CAMPP49913 170 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 REEP5Q00765 189 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 RGS1Q08116 209 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 FAM53BQ14153 422 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 SF3B4Q15427 424 aaKnown RBP eCLIP6.33□□□□□ -1.46e-7■■■■■ 30.8
SDCBP-208ENST00000520228 XKR6Q5GH73 641 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 PRSS57Q6UWY2 283 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 TMIGD1Q6UXZ0 262 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 TIFABQ6ZNK6 161 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 SHISA6Q6ZSJ9 500 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 LRRC70Q7Z2Q7 622 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 RAB43Q86YS6 212 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 PRSS58Q8IYP2 241 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 CNPY4Q8N129 248 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 TRPV3Q8NET8 790 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 OR9A4Q8NGU2 314 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 UBLCP1Q8WVY7 318 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-208ENST00000520228 ADGRG7Q96K78 797 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 IP6K3Q96PC2 410 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 ING2Q9H160 280 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 ADNPQ9H2P0 1102 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 SPNS1Q9H2V7 528 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 PLK3Q9H4B4 646 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 EHD1Q9H4M9 534 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 ANKHQ9HCJ1 492 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 PSMC3IPQ9P2W1 217 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-208ENST00000520228 OPTCQ9UBM4 332 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 CTSFQ9UBX1 484 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 FETUBQ9UGM5 382 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 MRPS2Q9Y399 296 aaKnown RBP6.33□□□□□ -1.4
SDCBP-208ENST00000520228 ANGPTL3Q9Y5C1 460 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 SLC22A7Q9Y694 548 aa6.33□□□□□ -1.4
SDCBP-208ENST00000520228 ATRXP46100 2492 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 IGLV3-12A0A075B6K2 115 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 URADA6NGE7 173 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 ARGFXA6NJG6 315 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 H0YIG0 161 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 MKRN2OSH3BPM6 223 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 K7EPI3 171 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 SGK494L7N484 410 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 NSA2O95478 260 aaKnown RBP6.32□□□□□ -1.4
SDCBP-208ENST00000520228 IGHEP01854 428 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 SHBGP04278 402 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 PRB1P04280 392 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 SERPINA6P08185 405 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 IL1RNP18510 177 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 MMP11P24347 488 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 HNF4AP41235 474 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 CCL11P51671 97 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 EMP2P54851 167 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 VSNL1P62760 191 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 MAT1AQ00266 395 aaKnown RBP6.32□□□□□ -1.4
SDCBP-208ENST00000520228 IRF8Q02556 426 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 KLC1Q07866 573 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 CHIT1Q13231 466 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 DOC2AQ14183 400 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 HERC3Q15034 1050 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 VWA2Q5GFL6 755 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 PAGE2BQ5JRK9 111 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 HIST2H2AA3Q6FI13 130 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 ABHD13Q7L211 337 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 PRSS41Q7RTY9 318 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 SZRD1Q7Z422 152 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 SATL1Q86VE3 508 aa6.32□□□□□ -1.4
SDCBP-208ENST00000520228 APLFQ8IW19 511 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-208ENST00000520228 TEX9Q8N6V9 391 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms