RNA–Protein interactions for RNA: ENST00000518916.5

MSC-AS1-204, MSC antisense RNA 1, humanhuman

TSL 3 BASIC

Gene MSC-AS1, Length 864 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-204ENST00000518916 AGAP4Q96P64 663 aa13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 ALPK1Q96QP1 1244 aa13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 RBM4BQ9BQ04 359 aaKnown RBP13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 UTP23Q9BRU9 249 aaKnown RBP13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 RBM4Q9BWF3 364 aaKnown RBP13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 GABARAPL1Q9H0R8 117 aa13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 COQ10BQ9H8M1 238 aa13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 GALNT9Q9HCQ5 603 aa13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 KRCC1Q9NPI7 259 aaPredicted RBP13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 ACER3Q9NUN7 267 aa13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 STMN3Q9NZ72 180 aa13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 PDP1Q9P0J1 537 aaPredicted RBP13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 CNOT11Q9UKZ1 510 aaKnown RBP13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 SLC7A7Q9UM01 511 aa13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 NTNG1Q9Y2I2 539 aa13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 CPAMD8Q8IZJ3 1885 aa13.48□□□□□ -0.25
MSC-AS1-204ENST00000518916 A0A1B0GWA3 101 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 ARRDC5A6NEK1 342 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 A6NL46 340 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 SOCS2O14508 198 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 EFSO43281 561 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 OIP5O43482 229 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 TPST2O60704 377 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 SEMA7AO75326 666 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 ELAVL4P26378 380 aaKnown RBP13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 MSX1P28360 303 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 IFNGR2P38484 337 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 CASP3P42574 277 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 HSPA13P48723 471 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 MICAQ29983 383 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 SWT1Q5T5J6 900 aaKnown RBP13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 PRAMEF20Q5VT98 475 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 WBP2NLQ6ICG8 309 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 PPP4R4Q6NUP7 873 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 ISLR2Q6UXK2 745 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 RRM2BQ7LG56 351 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 GDF7Q7Z4P5 450 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 LSMEM1Q8N8F7 131 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 ATG16L2Q8NAA4 619 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 PAQR8Q8TEZ7 354 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 DUSP19Q8WTR2 217 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 DNAJA4Q8WW22 397 aaPredicted RBP13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 PRR14Q9BWN1 585 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 ZNF556Q9HAH1 456 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 CPNE5Q9HCH3 593 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 TIMMDC1Q9NPL8 285 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 SACM1LQ9NTJ5 587 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 ANKRD10Q9NXR5 420 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 PRDM4Q9UKN5 801 aa13.47□□□□□ -0.25
MSC-AS1-204ENST00000518916 A0A0B4J2E0 115 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 TRBV4-1A0A0J9YWV2 114 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 A0A1B0GX12 115 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 CHP2O43745 196 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 GMFGO60234 142 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 OR10H3O60404 316 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 CCL3P10147 92 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 GP1BBP13224 206 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 LIMS1P48059 325 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 IDH2P48735 452 aaKnown RBP13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 MASP1P48740 699 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 ST13P50502 369 aaKnown RBP13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 ALDH3A2P51648 485 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 HMGA2P52926 109 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 GAS1P54826 345 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 UGT2B15P54855 530 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 MFAP5Q13361 173 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 RAPSNQ13702 412 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 LAPTM4AQ15012 233 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 COL28A1Q2UY09 1125 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 ALG10BQ5I7T1 473 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 BICRALQ6AI39 1079 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 ULK3Q6PHR2 472 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 CBLN3Q6UW01 205 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 ZNF730Q6ZMV8 503 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 CCDC81Q6ZN84 652 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 LINC00696Q6ZRV3 163 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 TMEM179BQ7Z7N9 219 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 HS3ST5Q8IZT8 346 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 OR4K17Q8NGC6 315 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 MAGEE2Q8TD90 523 aaPredicted RBP13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 SNRNP27Q8WVK2 155 aaKnown RBP13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 DTNBP1Q96EV8 351 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 MPP4Q96JB8 637 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 ZNF184Q99676 751 aaPredicted RBP13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 RTN4RQ9BZR6 473 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 MAN2C1Q9NTJ4 1040 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 USE1Q9NZ43 259 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 LRFN1Q9P244 771 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 ICAM5Q9UMF0 924 aa13.46□□□□□ -0.25
MSC-AS1-204ENST00000518916 CFAP46Q8IYW2 2715 aa13.46□□□□□ -0.26
MSC-AS1-204ENST00000518916 ATMQ13315 3056 aa13.45□□□□□ -0.26
MSC-AS1-204ENST00000518916 SH3PXD2BA1X283 911 aa13.45□□□□□ -0.26
MSC-AS1-204ENST00000518916 ANKRD33BA6NCL7 494 aa13.45□□□□□ -0.26
MSC-AS1-204ENST00000518916 ANKUB1A6NFN9 424 aa13.45□□□□□ -0.26
MSC-AS1-204ENST00000518916 H0YJX3 145 aa13.45□□□□□ -0.26
MSC-AS1-204ENST00000518916 SNX4O95219 450 aa13.45□□□□□ -0.26
MSC-AS1-204ENST00000518916 PNMTP11086 282 aa13.45□□□□□ -0.26
MSC-AS1-204ENST00000518916 ANXA8P13928 327 aa13.45□□□□□ -0.26
MSC-AS1-204ENST00000518916 CDH2P19022 906 aaPredicted RBP13.45□□□□□ -0.26
MSC-AS1-204ENST00000518916 IGFBP5P24593 272 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms