RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 OR12D1P0DN82 309 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 CD53P19397 219 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 CRYGSP22914 178 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 LOXP28300 417 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-218ENST00000518689 KCNJ5P48544 419 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 SLC18A1P54219 525 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 ZNF239Q16600 458 aaKnown RBP11.05□□□□□ -0.64
VEGFA-218ENST00000518689 DPY19L1Q2PZI1 675 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 TMEM176BQ3YBM2 270 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-218ENST00000518689 ANKRD34AQ69YU3 496 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 STAC2Q6ZMT1 411 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 TGIF2LYQ8IUE0 185 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 RFWD2Q8NHY2 731 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 RNF128Q8TEB7 428 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 XAGE5Q8WWM1 108 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 TLCD1Q96CP7 247 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 ZG16BQ96DA0 208 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 NEURL3Q96EH8 262 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 MRGPRX4Q96LA9 322 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 CCDC115Q96NT0 180 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 MED18Q9BUE0 208 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 THUMPD3Q9BV44 507 aaKnown RBP11.05□□□□□ -0.64
VEGFA-218ENST00000518689 LAT2Q9GZY6 243 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 SAP130Q9H0E3 1048 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 WDR55Q9H6Y2 383 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-218ENST00000518689 COQ10BQ9H8M1 238 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 GLRX2Q9NS18 164 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 THAP1Q9NVV9 213 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 GPR45Q9Y5Y3 372 aa11.05□□□□□ -0.64
VEGFA-218ENST00000518689 C9JVG2 144 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 HDAC3O15379 428 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 KIAA0513O60268 411 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 BCAS1O75363 584 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-218ENST00000518689 THBDP07204 575 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 EPHA3P29320 983 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 AGTR1P30556 359 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 S100A3P33764 101 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 CLNS1AP54105 237 aaKnown RBP11.04□□□□□ -0.64
VEGFA-218ENST00000518689 CTBP2P56545 445 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 NME5P56597 212 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 MAGOHP61326 146 aaKnown RBP11.04□□□□□ -0.64
VEGFA-218ENST00000518689 ADAM8P78325 824 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 KEAP1Q14145 624 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 QPRTQ15274 297 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 EXOC3L2Q2M3D2 409 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 DEFB113Q30KQ7 82 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 BEND6Q5SZJ8 279 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-218ENST00000518689 PDSS1Q5T2R2 415 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 TYW3Q6IPR3 259 aaKnown RBP11.04□□□□□ -0.64
VEGFA-218ENST00000518689 TNFAIP8L2Q6P589 184 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-218ENST00000518689 C16orf62Q7Z3J2 963 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 SPATA19Q7Z5L4 167 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 FAM71CQ8NEG0 241 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 VPS37AQ8NEZ2 397 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 TOR1AIP2Q8NFQ8 470 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 MGARPQ8TDB4 240 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 ABHD3Q8WU67 409 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 ROPN1LQ96C74 230 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 SLC35A5Q9BS91 424 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 INPP5KQ9BT40 448 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 KLHL4Q9C0H6 718 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 TMBIM4Q9HC24 238 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 EXD2Q9NVH0 621 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 ZNF226Q9NYT6 803 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 BTNL2Q9UIR0 455 aa11.04□□□□□ -0.64
VEGFA-218ENST00000518689 ROS1P08922 2347 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 GOLGA8QA0A0J9YX86 632 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 GOLGA8OA6NCC3 632 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 GOLGA8NF8WBI6 632 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 HMGN4O00479 90 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 AGR2O95994 175 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 CSTAP01040 98 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 KITP10721 976 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 CD99P14209 185 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 KLK2P20151 261 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 PGM1P36871 562 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 CDKN2CP42773 168 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 CCR4P51679 360 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 SESN3P58005 492 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 PLAURQ03405 335 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 CBFBQ13951 182 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 GTF2IRD2BQ6EKJ0 949 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 FRRS1Q6ZNA5 592 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 NUFIP2Q7Z417 695 aaKnown RBP11.03□□□□□ -0.64
VEGFA-218ENST00000518689 MAVSQ7Z434 540 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 GTF2IRD2Q86UP8 949 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 TMCO5AQ8N6Q1 288 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 ATP6V1C2Q8NEY4 427 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 RAB3IL1Q8TBN0 382 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 ZFP90Q8TF47 636 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 CPNE4Q96A23 557 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-218ENST00000518689 PIK3IP1Q96FE7 263 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 ZC3HAV1LQ96H79 300 aaKnown RBP11.03□□□□□ -0.64
VEGFA-218ENST00000518689 MAELQ96JY0 434 aaKnown RBP11.03□□□□□ -0.64
VEGFA-218ENST00000518689 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 OR52E6Q96RD3 313 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 QRSL1Q9H0R6 528 aaKnown RBP11.03□□□□□ -0.64
VEGFA-218ENST00000518689 C12orf49Q9H741 205 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 TIGARQ9NQ88 270 aa11.03□□□□□ -0.64
VEGFA-218ENST00000518689 POLE3Q9NRF9 147 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms