RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SIGLEC7Q9Y286 467 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 PMF1-BGLAPU3KQ54 211 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 RP1P56715 2156 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 FRG2CA6NGY1 282 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 MYL12AP19105 171 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 LIMK1P53667 647 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 CCL7P80098 99 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 LINC00114Q6XXX2 140 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 LINC00299Q6ZSB3 139 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 SLC15A4Q8N697 577 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 UBQLN4Q9NRR5 601 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 MKL2Q9ULH7 1088 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 SRPK3Q9UPE1 567 aa24.42■■□□□ 1.5
COL13A1-210ENST00000517713 BHLHE40O14503 412 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 APOL3O95236 402 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 HBQ1P09105 142 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 OPRL1P41146 370 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 TIMM50Q3ZCQ8 353 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 NXNL2Q5VZ03 156 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 SMARCD3Q6STE5 483 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 LAPTM4BQ86VI4 370 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 SLITRK4Q8IW52 837 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 ZNF527Q8NB42 609 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 ADIPOR1Q96A54 375 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 SH3YL1Q96HL8 342 aaPredicted RBP24.41■■□□□ 1.5
COL13A1-210ENST00000517713 NUDT9Q9BW91 350 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 SLC7A5P2Q9GIP4 190 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 VN1R1Q9GZP7 353 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 SLIRPQ9GZT3 109 aaKnown RBP24.41■■□□□ 1.5
COL13A1-210ENST00000517713 CHCHD3Q9NX63 227 aaKnown RBP24.41■■□□□ 1.5
COL13A1-210ENST00000517713 CARD8Q9Y2G2 431 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 CACNA1EQ15878 2313 aa24.41■■□□□ 1.5
COL13A1-210ENST00000517713 A0A1W2PQM1 296 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 SYNDIG1LA6NDD5 238 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 CFIP05156 583 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 NGFRP08138 427 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 ACY1Q03154 408 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 ZNF440Q8IYI8 595 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 OR14A16Q8NHC5 309 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 OIT3Q8WWZ8 545 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 DAZLQ92904 295 aaKnown RBP24.4■■□□□ 1.5
COL13A1-210ENST00000517713 CENPOQ9BU64 300 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 GAREM1Q9H706 876 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 H2AFY2Q9P0M6 372 aaPredicted RBP24.4■■□□□ 1.5
COL13A1-210ENST00000517713 CABIN1Q9Y6J0 2220 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 HCN1O60741 890 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 PTP4A3O75365 173 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 ANKRD34CP0C6C1 535 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 HPGDP15428 266 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 SOX3P41225 446 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 SOWAHCQ53LP3 525 aaPredicted RBP24.4■■□□□ 1.5
COL13A1-210ENST00000517713 MAML2Q8IZL2 1156 aaPredicted RBP24.4■■□□□ 1.5
COL13A1-210ENST00000517713 LNX2Q8N448 690 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 FAM181AQ8N9Y4 354 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 KBTBD8Q8NFY9 601 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 RNF31Q96EP0 1072 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 ART5Q96L15 291 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 RNF167Q9H6Y7 350 aa24.4■■□□□ 1.5
COL13A1-210ENST00000517713 MRTO4Q9UKD2 239 aaKnown RBP24.4■■□□□ 1.5
COL13A1-210ENST00000517713 C2orf92A0A1B0GVN3 265 aa24.39■■□□□ 1.5
COL13A1-210ENST00000517713 ADH7P40394 386 aa24.39■■□□□ 1.5
COL13A1-210ENST00000517713 KHDRBS1Q07666 443 aaKnown RBP eCLIP24.39■■□□□ 1.5
COL13A1-210ENST00000517713 RHBDD2Q6NTF9 364 aa24.39■■□□□ 1.5
COL13A1-210ENST00000517713 THSD4Q6ZMP0 1018 aa24.39■■□□□ 1.5
COL13A1-210ENST00000517713 CPOQ8IVL8 374 aa24.39■■□□□ 1.5
COL13A1-210ENST00000517713 BBS1Q8NFJ9 593 aa24.39■■□□□ 1.5
COL13A1-210ENST00000517713 OR4D9Q8NGE8 314 aa24.39■■□□□ 1.5
COL13A1-210ENST00000517713 GAL3ST4Q96RP7 486 aa24.39■■□□□ 1.5
COL13A1-210ENST00000517713 HINT3Q9NQE9 182 aaKnown RBP24.39■■□□□ 1.5
COL13A1-210ENST00000517713 EXOSC1Q9Y3B2 195 aaKnown RBP24.39■■□□□ 1.5
COL13A1-210ENST00000517713 TRAV27A0A087WT01 109 aa24.39■■□□□ 1.49
COL13A1-210ENST00000517713 HTR1FP30939 366 aa24.39■■□□□ 1.49
COL13A1-210ENST00000517713 GPR143P51810 404 aa24.39■■□□□ 1.49
COL13A1-210ENST00000517713 COPZ1P61923 177 aa24.39■■□□□ 1.49
COL13A1-210ENST00000517713 DCAF7P61962 342 aa24.39■■□□□ 1.49
COL13A1-210ENST00000517713 SIGLEC14Q08ET2 396 aa24.39■■□□□ 1.49
COL13A1-210ENST00000517713 MLLT11Q13015 90 aaPredicted RBP24.39■■□□□ 1.49
COL13A1-210ENST00000517713 FNDC7Q5VTL7 733 aa24.39■■□□□ 1.49
COL13A1-210ENST00000517713 CXXC5Q7LFL8 322 aaKnown RBP24.39■■□□□ 1.49
COL13A1-210ENST00000517713 OR51A7Q8NH64 312 aa24.39■■□□□ 1.49
COL13A1-210ENST00000517713 DNAJA4Q8WW22 397 aaPredicted RBP24.39■■□□□ 1.49
COL13A1-210ENST00000517713 IFT27Q9BW83 186 aa24.39■■□□□ 1.49
COL13A1-210ENST00000517713 CTSFQ9UBX1 484 aa24.39■■□□□ 1.49
COL13A1-210ENST00000517713 SCDO00767 359 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 YKT6O15498 198 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 UTS2O95399 124 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 CRYZQ08257 329 aaKnown RBP24.38■■□□□ 1.49
COL13A1-210ENST00000517713 COX15Q7KZN9 410 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 SHFQ7M4L6 423 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 RABEPKQ7Z6M1 372 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 OAFQ86UD1 273 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 EID2Q8N6I1 236 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 GATSQ8NAP1 163 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 FAM71CQ8NEG0 241 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 FN3KQ9H479 309 aa24.38■■□□□ 1.49
COL13A1-210ENST00000517713 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.37■■□□□ 1.49
COL13A1-210ENST00000517713 GNB5O14775 395 aa24.37■■□□□ 1.49
COL13A1-210ENST00000517713 RPS3AP61247 264 aaKnown RBP24.37■■□□□ 1.49
COL13A1-210ENST00000517713 EBPQ15125 230 aaKnown RBP24.37■■□□□ 1.49
COL13A1-210ENST00000517713 CD226Q15762 336 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms