RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 HPF1Q9NWY4 346 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 MARCH5Q9NX47 278 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 REV1Q9UBZ9 1251 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 COPS3Q9UNS2 423 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 V9GY05 133 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 MEIKINA0A087WXM9 373 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 C17orf113A0A1B0GUU1 675 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 GAPDHSO14556 408 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 CDC40O60508 579 aaKnown RBP eCLIP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 TPPPO94811 219 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 NUDT14O95848 222 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF550Q7Z398 422 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 FAM181AQ8N9Y4 354 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 POMGNT2Q8NAT1 580 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 CYB561A3Q8NBI2 242 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ZBTB44Q8NCP5 570 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 OR8S1Q8NH09 359 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 LGALS14Q8TCE9 139 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 AMDHD1Q96NU7 426 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SMG9Q9H0W8 520 aaKnown RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 UBQLN3Q9H347 655 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF443Q9Y2A4 671 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 YY2O15391 372 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SDC3O75056 442 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SLC25A12O75746 678 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 NFATC1O95644 943 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 DGCR2P98153 550 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM205Q6UW68 189 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM64Q6YI46 380 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 KANSL1Q7Z3B3 1105 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 KCTD20Q7Z5Y7 419 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 OR5J2Q8NH18 312 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 BPIFA2Q96DR5 249 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 DTD2Q96FN9 168 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ZC3H10Q96K80 434 aaKnown RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 GLIPR2Q9H4G4 154 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SEMA4GQ9NTN9 838 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 TBC1D3EA0A087X179 549 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM202A6NGA9 273 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 PLPP1O14494 284 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 LIMS3P0CW19 117 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 LIMS4P0CW20 117 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 AKAIN1P0CW23 69 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 C6P13671 934 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 HMGA1P17096 107 aaKnown RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 NDUFS1P28331 727 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ERVK-25P63136 954 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SLC7A9P82251 487 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 CRHR2Q13324 411 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 RBMS2Q15434 407 aaKnown RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 CDONQ4KMG0 1287 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 GPR139Q6DWJ6 353 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 OR9A2Q8NGT5 310 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 OR4K13Q8NH42 304 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 OR10G6Q8NH81 332 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF563Q8TA94 476 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SLC2A12Q8TD20 617 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ZMYND19Q96E35 227 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SGPP1Q9BX95 441 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 CHST8Q9H2A9 424 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 LIN7BQ9HAP6 207 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 RXFP3Q9NSD7 469 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 LAMP5Q9UJQ1 280 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SLC6A14Q9UN76 642 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 A4GNTQ9UNA3 340 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 EXO1Q9UQ84 846 aaKnown RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 PLEKHA6Q9Y2H5 1048 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 A0A0D9SG52 128 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 A0A1B0GUH1 482 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 CDHR4A6H8M9 788 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 KHNYNO15037 678 aaKnown RBP6.21□□□□□ -1.41
CPNE3-203ENST00000517490 SURF4O15260 269 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 GMDSO60547 372 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 NDUFB2O95178 105 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 CYB5AP00167 134 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 PTH2RP49190 550 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 RAB28P51157 221 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 MMP15P51511 669 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 GPR143P51810 404 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 PRMT2P55345 433 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 RAB5BP61020 215 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 SP3Q02447 781 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 ATXN7L3Q14CW9 347 aaPredicted RBP6.21□□□□□ -1.41
CPNE3-203ENST00000517490 GLT8D1Q68CQ7 371 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF620Q6ZNG0 422 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 GDF7Q7Z4P5 450 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM25Q86YD3 366 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 LILRA3Q8N6C8 439 aaPredicted RBP6.21□□□□□ -1.41
CPNE3-203ENST00000517490 CAMKVQ8NCB2 501 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 NSMAFQ92636 917 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 GPR137Q96N19 417 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 SRMSQ9H3Y6 488 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 XKR8Q9H6D3 395 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 EVA1AQ9H8M9 152 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 MED20Q9H944 212 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 B3GAT2Q9NPZ5 323 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 BIN3Q9NQY0 253 aa6.21□□□□□ -1.41
CPNE3-203ENST00000517490 EVA1BQ9NVM1 165 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms