RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 COPS4Q9BT78 406 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CDCA4Q9BXL8 241 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RTN4RQ9BZR6 473 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 YIPF3Q9GZM5 350 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NRSN2Q9GZP1 204 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 EGLN3Q9H6Z9 239 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SYNDIG1Q9H7V2 258 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 VCX3AQ9NNX9 186 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 AMBNQ9NP70 447 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 KRCC1Q9NPI7 259 aaPredicted RBP4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ACOT13Q9NPJ3 140 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 C11orf16Q9NQ32 467 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 MEPEQ9NQ76 525 aaPredicted RBP4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 C20orf141Q9NUB4 165 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 MRPS18AQ9NVS2 196 aaKnown RBP4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TVP23BQ9NYZ1 205 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CNIH4Q9P003 139 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NXT1Q9UKK6 140 aaKnown RBP4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ICAM5Q9UMF0 924 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SIGLEC7Q9Y286 467 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TMEM5Q9Y2B1 443 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 MED31Q9Y3C7 131 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SNX5Q9Y5X3 404 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CDH10Q9Y6N8 788 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 COMMD3-BMI1R4GMX3 469 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 R4GN57 208 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 WDFY3Q8IZQ1 3526 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 MED12Q93074 2177 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CFAP54Q96N23 3096 aa4.98□□□□□ -1.61
SCARNA20.4-201ENST00000516969 HTR3EA5X5Y0 456 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 OR6C70A6NIJ9 312 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TMX2-CTNND1H3BSU7 103 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 AGRPO00253 132 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SCDO00767 359 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 BHLHE40O14503 412 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ZNF264O43296 627 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 OIP5O43482 229 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TLX2O43763 284 aaPredicted RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 FADS1O60427 444 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 EIF4E2O60573 245 aaKnown RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ICOSLGO75144 302 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 REM1O75628 298 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TRMUO75648 421 aaKnown RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 KLF7O75840 302 aaPredicted RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 DKK1O94907 266 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NADKO95544 446 aaPredicted RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 HMGN1P05114 100 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 KLK3P07288 261 aaPredicted RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 STSP08842 583 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ADRA2AP08913 450 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 UBL4AP11441 157 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 IFI30P13284 250 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NAGAP17050 411 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ENDOUP21128 410 aaKnown RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ABCD3P28288 659 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 MAP2K4P45985 399 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NUDT6P53370 316 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 GAS1P54826 345 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SLC26A5P58743 744 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 E2F1Q01094 437 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ST3GAL4Q11206 333 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 LSAMPQ13449 338 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NCF4Q15080 339 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TBCEQ15813 527 aaPredicted RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NDUFAF6Q330K2 333 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SYT14P1Q58G82 188 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ALG10BQ5I7T1 473 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 GPR107Q5VW38 600 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CDCP2Q5VXM1 449 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 MEDAGQ5VYS4 303 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 PLAG1Q6DJT9 500 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 DESI1Q6ICB0 168 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 WBP2NLQ6ICG8 309 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RPL13AP3Q6NVV1 102 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 PAPD4Q6PIY7 484 aaKnown RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CBLN3Q6UW01 205 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 FAM198BQ6UWH4 519 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 HSDL2Q6YN16 418 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 PRR23CQ6ZRP0 262 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 AHSA2Q719I0 299 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NUP54Q7Z3B4 507 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ANKRD13BQ86YJ7 626 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CLVS1Q8IUQ0 354 aaPredicted RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ERI1Q8IV48 349 aaKnown RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 PRR22Q8IZ63 422 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SLC43A2Q8N370 569 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 AMER2Q8N7J2 671 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ZNF614Q8N883 585 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 OR4Q3Q8NH05 313 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TMEM163Q8TC26 289 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 LIPHQ8WWY8 451 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 METTL21AQ8WXB1 218 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 FCGR1BQ92637 280 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RORBQ92753 470 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 PMEPA1Q969W9 287 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 C3orf49Q96BT1 292 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 C12orf43Q96C57 262 aaKnown RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NMD3Q96D46 503 aaKnown RBP4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 BPIFA2Q96DR5 249 aa4.97□□□□□ -1.61
SCARNA20.4-201ENST00000516969 OMA1Q96E52 524 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms