RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 USP36Q9P275 1121 aaKnown RBP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 MDFIC2A0A1B0GVS7 189 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 UGDHO60701 494 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 RAC2P15153 192 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 ZNF26P17031 533 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SELENOVP59797 346 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 MALLQ13021 153 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 EIF2B1Q14232 305 aaKnown RBP12.49□□□□□ -0.41
TCOF1-214ENST00000515035 NHSL2Q5HYW2 709 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 TANGO2Q6ICL3 276 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SULF2Q8IWU5 870 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 ADAMTS16Q8TE57 1224 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 PLEKHJ1Q9NW61 149 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SLAMF8Q9P0V8 285 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 FUT1P19526 365 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 DDCP20711 480 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 PRKAR1BP31321 381 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 BMPR1AP36894 532 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 TM4SF4P48230 202 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 FAM122BQ7Z309 247 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 LYSMD2Q8IV50 215 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 GLB1L2Q8IW92 636 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 LMX1AQ8TE12 382 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 ACOT11Q8WXI4 607 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SLC35B4Q969S0 331 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 KCTD12Q96CX2 325 aaKnown RBP12.49□□□□□ -0.41
TCOF1-214ENST00000515035 GPR62Q9BZJ7 368 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 C11orf54Q9H0W9 315 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-214ENST00000515035 LDAHQ9H6V9 325 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 GALNT9Q9HCQ5 603 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 RAB19A4D1S5 217 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 MYADML2A6NDP7 307 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 K7ERQ8 282 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 AIPO00170 330 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 TIMP1P01033 207 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 GYPBP06028 91 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 GSTM4Q03013 218 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SLC14A1Q13336 389 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 RBMS2Q15434 407 aaKnown RBP12.49□□□□□ -0.41
TCOF1-214ENST00000515035 FCRLAQ7L513 359 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 OCSTAMPQ9BR26 566 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 BTBD2Q9BX70 525 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 C20orf27Q9GZN8 174 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SPO11Q9Y5K1 396 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SHOXO15266 292 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 GABARAPO95166 117 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 ALDOCP09972 364 aaKnown RBP12.49□□□□□ -0.41
TCOF1-214ENST00000515035 GIPRP48546 466 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SPINT3P49223 89 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SOX4Q06945 474 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SQSTM1Q13501 440 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 PODNL1Q6PEZ8 512 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 CADM3Q8N126 398 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 KDM8Q8N371 416 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 C1QTNF2Q9BXJ5 285 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 ACPTQ9BZG2 426 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 SLAMF7Q9NQ25 335 aa12.49□□□□□ -0.41
TCOF1-214ENST00000515035 IGKV6-21A0A0C4DH24 114 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 TTLL8A6PVC2 850 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 DPM1O60762 260 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 PTHP01270 115 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 RAB3AP20336 220 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 ERVFC1P60507 584 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 LTBQ06643 244 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 GKN2Q86XP6 184 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 OR4M1Q8NGD0 313 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 BORCS7Q96B45 105 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 ZNF681Q96N22 645 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 ZNF578Q96N58 590 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-214ENST00000515035 MS4A4EQ96PG1 132 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 PSD2Q9BQI7 771 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 OR52D1Q9H346 318 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 INPP5EQ9NRR6 644 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 KLHL13Q9P2N7 655 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 TP53TG5Q9Y2B4 290 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 IGKV6D-21A0A0A0MT36 114 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 MAN2B1O00754 1011 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 GPR39O43194 453 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 SYNGR4O95473 234 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 ARAFP10398 606 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 C6P13671 934 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 IL1RNP18510 177 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 PKLRP30613 574 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 GDNFP39905 211 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 CLDN6P56747 220 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 SHC2P98077 582 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 NIPAL3Q6P499 406 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 SLC46A3Q7Z3Q1 461 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 RETREG3Q86VR2 466 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 GPR150Q8NGU9 434 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 TRMT2BQ96GJ1 504 aaKnown RBP12.48□□□□□ -0.41
TCOF1-214ENST00000515035 SGIP1Q9BQI5 828 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 FBXO7Q9Y3I1 522 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 A0A0B4J2A0 478 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 CBR1P16152 277 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 GABRA5P31644 462 aa12.48□□□□□ -0.41
TCOF1-214ENST00000515035 RPL23AP62750 156 aaKnown RBP12.48□□□□□ -0.41
TCOF1-214ENST00000515035 PGGHGQ32M88 737 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms