RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 TM2D1Q9BX74 207 aa4.01□□□□□ -1.77
CALCOCO2-222ENST00000514006 VCPKMTQ9H867 229 aa4.01□□□□□ -1.77
CALCOCO2-222ENST00000514006 PNO1Q9NRX1 252 aaKnown RBP4.01□□□□□ -1.77
CALCOCO2-222ENST00000514006 PRPF19Q9UMS4 504 aaKnown RBP4.01□□□□□ -1.77
CALCOCO2-222ENST00000514006 WDR19Q8NEZ3 1342 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 SYNRGQ9UMZ2 1314 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PPIAL4EA0A075B759 164 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PP2D1A8MPX8 630 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 E9PLD3 99 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 G3V3Y1 287 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 HAS3O00219 553 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 DNALI1O14645 258 aaPredicted RBP4□□□□□ -1.77
CALCOCO2-222ENST00000514006 RGS16O15492 202 aaPredicted RBP4□□□□□ -1.77
CALCOCO2-222ENST00000514006 CACNG3O60359 315 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 RAMP3O60896 148 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 UPK3AO75631 287 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PABPC4LP0CB38 370 aaKnown RBP4□□□□□ -1.77
CALCOCO2-222ENST00000514006 CT45A10P0DMU9 189 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PPIAL4FP0DN26 164 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 ETS2P15036 469 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 BCL3P20749 454 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 GNA11P29992 359 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 YWHABP31946 246 aaKnown RBP4□□□□□ -1.77
CALCOCO2-222ENST00000514006 ETV5P41161 510 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PRELPP51888 382 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 HSPA2P54652 639 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 TGM3Q08188 693 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 CD300CQ08708 224 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 KLRB1Q12918 225 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 ELAVL2Q12926 359 aaKnown RBP4□□□□□ -1.77
CALCOCO2-222ENST00000514006 KCNJ11Q14654 390 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PPP1R7Q15435 360 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PPP1R3AQ16821 1122 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 KLHL38Q2WGJ6 581 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 KRTAP24-1Q3LI83 254 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 UQCC3Q6UW78 93 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 MCOLN2Q8IZK6 566 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 CSNK1A1LQ8N752 337 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 BBOF1Q8ND07 529 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 ST8SIA1Q92185 356 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 SLC35A5Q9BS91 424 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 TRIM51Q9BSJ1 452 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 LRRC61Q9BV99 259 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 TRIM62Q9BVG3 475 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 OPN3Q9H1Y3 402 aaPredicted RBP4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PNNQ9H307 717 aaKnown RBP4□□□□□ -1.77
CALCOCO2-222ENST00000514006 HEXA-AS1Q9H8Q6 139 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 POPDC2Q9HBU9 364 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 NANSQ9NR45 359 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 GLRX2Q9NS18 164 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PAK1IP1Q9NWT1 392 aaPredicted RBP4□□□□□ -1.77
CALCOCO2-222ENST00000514006 IMPAD1Q9NX62 359 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 KLHL28Q9NXS3 571 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 SENP1Q9P0U3 644 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PISDQ9UG56 409 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 SAMD4AQ9UPU9 718 aaKnown RBP4□□□□□ -1.77
CALCOCO2-222ENST00000514006 CA5BQ9Y2D0 317 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 L3MBTL1Q9Y468 752 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 PPIAL4AQ9Y536 164 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 USP16Q9Y5T5 823 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 NOTCH4Q99466 2003 aa4□□□□□ -1.77
CALCOCO2-222ENST00000514006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4□□□□□ -1.77
CALCOCO2-222ENST00000514006 RALGAPA1Q6GYQ0 2036 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 KRTAP29-1A8MX34 341 aaPredicted RBP3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 EPM2AB3EWF7 344 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 H0YC42 278 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 RNF13O43567 381 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 ATP5LO75964 103 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 IGHG4P01861 327 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 MELTFP08582 738 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 FGF4P08620 206 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 ANXA8P13928 327 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 ATP1B2P14415 290 aaPredicted RBP3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 POLR2EP19388 210 aaKnown RBP3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 CASP14P31944 242 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 NF2P35240 595 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 GYG1P46976 350 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 ATP12AP54707 1039 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 LIM2P55344 173 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 ENPEPQ07075 957 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 BST2Q10589 180 aaKnown RBP3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 SLC15A2Q16348 729 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 TRIM16LQ309B1 348 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 DMRTC1Q5HYR2 192 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 NHLRC3Q5JS37 347 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 C1orf185Q5T7R7 199 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 ANXA8L1Q5VT79 327 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 LIPNQ5VXI9 398 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 LEMD1Q68G75 181 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 RNASEKQ6P5S7 137 aaKnown RBP3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 FAM199XQ6PEV8 388 aaPredicted RBP3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 ZNF613Q6PF04 617 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 CCBE1Q6UXH8 406 aaPredicted RBP3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 TRIM69Q86WT6 500 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 CCDC65Q8IXS2 484 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 CEP112Q8N8E3 955 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 C17orf47Q8NEP4 570 aa3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 MAGEE2Q8TD90 523 aaPredicted RBP3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 TFB1MQ8WVM0 346 aaKnown RBP3.99□□□□□ -1.77
CALCOCO2-222ENST00000514006 MRPS31Q92665 395 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms