RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 RILPQ96NA2 401 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 NDNQ99608 321 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 H2AFJQ9BTM1 129 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 KLHL4Q9C0H6 718 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 OPN3Q9H1Y3 402 aaPredicted RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 RHBGQ9H310 441 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 RNF122Q9H9V4 155 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 OBP2BQ9NPH6 170 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 ABCF3Q9NUQ8 709 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 CISD1Q9NZ45 108 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 NENFQ9UMX5 172 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 DAPP1Q9UN19 280 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 EXO1Q9UQ84 846 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 RUVBL2Q9Y230 463 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 R3HDM2Q9Y2K5 976 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 UBE2J1Q9Y385 318 aaPredicted RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF175Q9Y473 711 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 MAD1L1Q9Y6D9 718 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 GXYLT2A0PJZ3 443 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 SYCE3A1L190 88 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 LRIT2A6NDA9 550 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 GOLGA6L9A6NEM1 432 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 IFITM10A6NMD0 228 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 BTNL10A8MVZ5 291 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 E5RI56 91 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 H7C417 338 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 J3KTA2 159 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 CDC7O00311 574 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 ACOT8O14734 319 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 TNFRSF13BO14836 293 aaPredicted RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 VENTXO95231 258 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 METTL18O95568 372 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 ETHE1O95571 254 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 SERPIND1P05546 499 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 C8GP07360 202 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 NGFRP08138 427 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 CCDC166P0CW27 439 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 CDH1P12830 882 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 DUSP1P28562 367 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 PPP2R1BP30154 601 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 SRD5A2P31213 254 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 FMO4P31512 558 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 STIP1P31948 543 aaKnown RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 TTKP33981 857 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 CETN2P41208 172 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 DIO1P49895 249 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 LHX2P50458 406 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 EFNA4P52798 201 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 LIM2P55344 173 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 CLDN18P56856 261 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 EIF3EP60228 445 aaKnown RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 RPS13P62277 151 aaKnown RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 TBPL1P62380 186 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 BTN3A2P78410 334 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 IGLV3-21P80748 117 aaPredicted RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 ZBED6P86452 979 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 MYL5Q02045 173 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 SRYQ05066 204 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 NAE1Q13564 534 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 GUSBP1Q15486 140 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 SLC18A3Q16572 532 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 ADPRMQ3LIE5 342 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 CTSL3PQ5NE16 218 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 FAM90A2PQ658T7 463 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 CCDC144NLQ6NUI1 221 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 NEPROQ6NW34 567 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 KLHL17Q6TDP4 642 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 SBSNQ6UWP8 590 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 PLXDC2Q6UX71 529 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 YRDCQ86U90 279 aaKnown RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 IFNEQ86WN2 208 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 GPSM1Q86YR5 675 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 C9orf40Q8IXQ3 194 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF321PQ8N8H1 164 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 GBP7Q8N8V2 638 aaPredicted RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 PRELID2Q8N945 189 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 SRFBP1Q8NEF9 429 aaKnown RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 C17orf47Q8NEP4 570 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 OR52K1Q8NGK4 314 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 OR6K3Q8NGY3 331 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 OR14L1PQ8NHC6 308 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 OSR1Q8TAX0 266 aaPredicted RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 RAB3IL1Q8TBN0 382 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 ATL1Q8WXF7 558 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 CCT6BQ92526 530 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 LPGAT1Q92604 370 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 KCNJ9Q92806 393 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 PYCR2Q96C36 320 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 MS4A6EQ96DS6 147 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF479Q96JC4 524 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 RUNDC3BQ96NL0 473 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 SERINC2Q96SA4 455 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 AIF1LQ9BQI0 150 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 PELOQ9BRX2 385 aaKnown RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 NTMT1Q9BV86 223 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 TRIM2Q9C040 744 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 OR2B2Q9GZK3 357 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 ROGDIQ9GZN7 287 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 MYLK2Q9H1R3 596 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms