RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	TMCO5A	Q8N6Q1	288 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	PHF10	Q8WUB8	498 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	FAR1	Q8WVX9	515 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	NR4A3	Q92570	626 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	FAM162A	Q96A26	154 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	SLX1A	Q9BQ83	275 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	GORASP2	Q9H8Y8	452 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	EXOSC3	Q9NQT5	275 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	CTPS2	Q9NRF8	586 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	SDHAF3	Q9NRP4	125 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	PLSCR2	Q9NRY7	297 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	DCAF13	Q9NV06	445 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	SLC35A3	Q9Y2D2	325 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	KIAA1549	Q9HCM3	1950 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	TTLL8	A6PVC2	850 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	KDM4E	B2RXH2	506 aa	Predicted RBP	13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	TFEC	O14948	347 aa	Predicted RBP	13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	SERPINB7	O75635	380 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	PRKD3	O94806	890 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	ZNF682	O95780	498 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	OPN1LW	P04000	364 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	PRKCA	P17252	672 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	ELAVL4	P26378	380 aa	Known RBP	13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	SRD5A2	P31213	254 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	GFRA1	P56159	465 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	DSCR4	P56555	118 aa	Predicted RBP	13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	CLDN15	P56746	228 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	SESN3	P58005	492 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	SELENOW	P63302	87 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	C3AR1	Q16581	482 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	SLC22A16	Q86VW1	577 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	MISP	Q8IVT2	679 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	ARHGAP24	Q8N264	748 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	OIT3	Q8WWZ8	545 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	TPD52L3	Q96J77	140 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	HSH2D	Q96JZ2	352 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	AMBRA1	Q9C0C7	1298 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	ANAPC2	Q9UJX6	822 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	ZNF232	Q9UNY5	417 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	POMP	Q9Y244	141 aa		13.17	□□□□□ -0.3
MATR3-238	ENST00000512107	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	OR2M5	A3KFT3	312 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107		H0YC42	278 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107		H3BNH8	94 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	PYCARD-AS1	I3L0S3	204 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107		J3KTA2	159 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	ETV2	O00321	342 aa	Predicted RBP	13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	IGHG3	P01860	377 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	MSX1	P28360	303 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	IDH2	P48735	452 aa	Known RBP	13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	TPD52	P55327	224 aa	Predicted RBP	13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	C19orf57	Q0VDD7	668 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	SLC10A1	Q14973	349 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	TOMM20	Q15388	145 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	IGFBP7	Q16270	282 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	ZSCAN26	Q16670	478 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	SPATS1	Q496A3	300 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	LCN8	Q6JVE9	175 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	FAM180A	Q6UWF9	173 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	PLXDC2	Q6UX71	529 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	CARM1	Q86X55	608 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	FAM98A	Q8NCA5	519 aa	Known RBP	13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	CPT1C	Q8TCG5	803 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	RNF145	Q96MT1	663 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	GPR137	Q96N19	417 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	SPATA5L1	Q9BVQ7	753 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	ACKR4	Q9NPB9	350 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	OLAH	Q9NV23	265 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	TAS2R10	Q9NYW0	307 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	ACTR3B	Q9P1U1	418 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	MAGEL2	Q9UJ55	1249 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	DKKL1	Q9UK85	242 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	SH3GLB1	Q9Y371	365 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	ZNF337	Q9Y3M9	751 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107	MYO18B	Q8IUG5	2567 aa		13.16	□□□□□ -0.3
MATR3-238	ENST00000512107		A0A1B0GTH9	108 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107		A0A1B0GVC2	190 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	CFAP73	A6NFT4	308 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	SYT5	O00445	386 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	FFAR1	O14842	300 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	BMP7	P18075	431 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	PTN	P21246	168 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	YAP1	P46937	504 aa	Known RBP	13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	SUMO3	P55854	103 aa	Predicted RBP	13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	DLX5	P56178	289 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	BNIP2	Q12982	314 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	CBFB	Q13951	182 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	CCNI	Q14094	377 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	SLC25A53	Q5H9E4	307 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	WDR88	Q6ZMY6	472 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	PLEKHM3	Q6ZWE6	761 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	OR14L1P	Q8NHC6	308 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	SLC26A7	Q8TE54	656 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	ASB9	Q96DX5	294 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	DNAJA3	Q96EY1	480 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	C7orf34	Q96L11	122 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	UGT2B28	Q9BY64	529 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	ADAM19	Q9H013	955 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	ACER3	Q9NUN7	267 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms