RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CLEC4FQ8N1N0 589 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 CLDN19Q8N6F1 224 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 KIR3DL3Q8N743 410 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 STXBP6Q8NFX7 210 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 OR1F12Q8NHA8 337 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 PIGCQ92535 297 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 EMG1Q92979 244 aaKnown RBP2.31□□□□□ -2.04
CHD1-207ENST00000511628 HAVCR1Q96D42 359 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 FAHD2AQ96GK7 314 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 LINC00167Q96N53 147 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 OR5M11Q96RB7 305 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 MCHR1Q99705 422 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 OMDQ99983 421 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 GON7Q9BXV9 100 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 YTHDF1Q9BYJ9 559 aaKnown RBP2.31□□□□□ -2.04
CHD1-207ENST00000511628 MAGT1Q9H0U3 335 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 NXF5Q9H1B4 397 aaKnown RBP2.31□□□□□ -2.04
CHD1-207ENST00000511628 RHBGQ9H310 441 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 SLC17A5Q9NRA2 495 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 IL36GQ9NZH8 169 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 DPM3Q9P2X0 92 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 LCMT1Q9UIC8 334 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 PTBP2Q9UKA9 531 aaKnown RBP2.31□□□□□ -2.04
CHD1-207ENST00000511628 MOKQ9UQ07 419 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 SCML2Q9UQR0 700 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 WDR45Q9Y484 360 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 PPIAL4AQ9Y536 164 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 ANKRD30BQ9BXX2 1392 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 FAM168BA1KXE4 195 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 LRP5LA4QPB2 252 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 H0Y9J4 135 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 ARPC3O15145 178 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 RIPK2O43353 540 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 H2AFZP0C0S5 128 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 SERPINA2P20848 420 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 ZBTB25P24278 435 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 ADORA2BP29275 332 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 PRPHP41219 470 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 RPL29P47914 159 aaKnown RBP2.3□□□□□ -2.04
CHD1-207ENST00000511628 MEOX2P50222 304 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 AP3M2P53677 418 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 RPS14P62263 151 aaKnown RBP2.3□□□□□ -2.04
CHD1-207ENST00000511628 IGLV3-21P80748 117 aaPredicted RBP2.3□□□□□ -2.04
CHD1-207ENST00000511628 OTUD4Q01804 1114 aaKnown RBP2.3□□□□□ -2.04
CHD1-207ENST00000511628 CD47Q08722 323 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 RIPPLY1Q0D2K3 151 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 C1orf61Q13536 156 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 TPD52L1Q16890 204 aaPredicted RBP2.3□□□□□ -2.04
CHD1-207ENST00000511628 UTF1Q5T230 341 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 CENPPQ6IPU0 288 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 KRTAP11-1Q8IUC1 163 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 C15orf54Q8N8G6 183 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 OR4D5Q8NGN0 318 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 OR8J1Q8NGP2 316 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 OR13F1Q8NGS4 319 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 FBXO30Q8TB52 745 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 PAQR8Q8TEZ7 354 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 AENQ8WTP8 325 aaKnown RBP2.3□□□□□ -2.04
CHD1-207ENST00000511628 RLN3Q8WXF3 142 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 SLC25A38Q96DW6 304 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 TGM7Q96PF1 710 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 PAXXQ9BUH6 204 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 RNF126Q9BV68 326 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 CHIAQ9BZP6 476 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 SMOXQ9NWM0 555 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 B3GNT2Q9NY97 397 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 PIPOXQ9P0Z9 390 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 NYAP2Q9P242 653 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 PCSK1NQ9UHG2 260 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 KIF25-AS1Q9Y6Z4 181 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 PTCH1Q13635 1447 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 CHD4Q14839 1912 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 LRRK1Q38SD2 2015 aa2.3□□□□□ -2.04
CHD1-207ENST00000511628 IGLV8-61A0A075B6I0 122 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 IGHV2-70DA0A0C4DH43 119 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 KLF18A0A0U1RQI7 1052 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 KIF2AO00139 706 aaPredicted RBP2.29□□□□□ -2.04
CHD1-207ENST00000511628 CXCL11O14625 94 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 TAPBPO15533 448 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 H2BFMP0C1H6 154 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 CCDC166P0CW27 439 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 IGLL1P15814 213 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 NCK1P16333 377 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 POLR2EP19388 210 aaKnown RBP2.29□□□□□ -2.04
CHD1-207ENST00000511628 VDAC1P21796 283 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 TAGLN2P37802 199 aaKnown RBP2.29□□□□□ -2.04
CHD1-207ENST00000511628 DHPSP49366 369 aaPredicted RBP2.29□□□□□ -2.04
CHD1-207ENST00000511628 CASP4P49662 377 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 RPL32P62910 135 aaKnown RBP2.29□□□□□ -2.04
CHD1-207ENST00000511628 MAP2K1Q02750 393 aaPredicted RBP2.29□□□□□ -2.04
CHD1-207ENST00000511628 CSTF1Q05048 431 aaKnown RBP2.29□□□□□ -2.04
CHD1-207ENST00000511628 SLC25A52Q3SY17 297 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 SPATA46Q5T0L3 261 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 KDELC1Q6UW63 502 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 SYT10Q6XYQ8 523 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 C16orf62Q7Z3J2 963 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 C17orf82Q86X59 251 aaPredicted RBP2.29□□□□□ -2.04
CHD1-207ENST00000511628 FBXO16Q8IX29 292 aaPredicted RBP2.29□□□□□ -2.04
CHD1-207ENST00000511628 ZNF679Q8IYX0 411 aa2.29□□□□□ -2.04
CHD1-207ENST00000511628 ZCCHC7Q8N3Z6 543 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms