RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 SHC1P29353 583 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 ARFIP2P53365 341 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 FOXF1Q12946 379 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 QPRTQ15274 297 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 GUSBP1Q15486 140 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 RUNDC3AQ59EK9 446 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 PRAMEF8Q5VWM4 474 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 PRAMEF7Q5VXH5 474 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 HMGN2P46Q86SG4 172 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 UBQLNLQ8IYU4 475 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 ZNF295-AS1Q8N0V1 137 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 FIG4Q92562 907 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 CNOT9Q92600 299 aaKnown RBP10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 ZNF845Q96IR2 970 aaPredicted RBP10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 THUMPD3Q9BV44 507 aaKnown RBP10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 RNF122Q9H9V4 155 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 A4GALTQ9NPC4 353 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 SAR1AQ9NR31 198 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 P2RX2Q9UBL9 471 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 NDUFAF1Q9Y375 327 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 ZNF175Q9Y473 711 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 CHST2Q9Y4C5 530 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 CELSR2Q9HCU4 2923 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 A0A0G2JPF8 293 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 HNRNPCL2B2RXH8 293 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 HNRNPCL3B7ZW38 293 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 FAAHO00519 579 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 FBP2O00757 339 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 SEC14L5O43304 696 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 HNRNPCL1O60812 293 aaKnown RBP10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 TNFSF13O75888 250 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 AQP8O94778 261 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 CRHP06850 196 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 DBIP07108 87 aaKnown RBP10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 SNRPB2P08579 225 aaKnown RBP10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 HNRNPCL4P0DMR1 293 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 TMIGD3P0DMS9 266 aaPredicted RBP10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 PRF1P14222 555 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 BMP5P22003 454 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 OPRM1P35372 400 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 SLC6A8P48029 635 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 CRISP3P54108 245 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 SESN3P58005 492 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 HPCAP84074 193 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 CBFBQ13951 182 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 ADRM1Q16186 407 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 ESPNLQ6ZVH7 1005 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 DMRTC2Q8IXT2 367 aaPredicted RBP10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 LILRA2Q8N149 483 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 OR10D3Q8NH80 312 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 FNDC9Q8TBE3 224 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 C10orf82Q8WW14 230 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 ST8SIA1Q92185 356 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 MAL2Q969L2 176 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 MARVELD3Q96A59 401 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 TMEM19Q96HH6 336 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 CPPED1Q9BRF8 314 aaPredicted RBP10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 PINK1Q9BXM7 581 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 RAD21L1Q9H4I0 556 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 ACER3Q9NUN7 267 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 DNAJB12Q9NXW2 375 aaKnown RBP10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 CALML5Q9NZT1 146 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 KLHL14Q9P2G3 628 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 STOML1Q9UBI4 398 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 LEF1Q9UJU2 399 aaPredicted RBP10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 PRDM4Q9UKN5 801 aa10.55□□□□□ -0.72
HMGXB3-203ENST00000510472 PKDREJQ9NTG1 2253 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 A0A1W2PNV4 684 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 CDHR4A6H8M9 788 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 SLC22A20A6NK97 555 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 DVL2O14641 736 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 CYP7B1O75881 506 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 PGM3O95394 542 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 NUDT14O95848 222 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 OPN1LWP04000 364 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 BCHEP06276 602 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 ARAFP10398 606 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 PGCP20142 388 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 PPIBP23284 216 aaKnown RBP10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 ADSLP30566 484 aaPredicted RBP10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 KIR2DL2P43627 348 aaPredicted RBP10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 AGFG1P52594 562 aaKnown RBP10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 RPS3AP61247 264 aaKnown RBP10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 EEF1A1P68104 462 aaKnown RBP10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 KLF10Q13118 480 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 PON3Q15166 354 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 RPS26P11Q5JNZ5 115 aaPredicted RBP10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 EEF1A1P5Q5VTE0 462 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 PLEKHM3Q6ZWE6 761 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 CHMP1BQ7LBR1 199 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 VRK2Q86Y07 508 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 GRAMD2AQ8IUY3 354 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 CLIP4Q8N3C7 705 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 OR52P1PQ8NH57 321 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 OR2V1Q8NHB1 315 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 SMPDL3BQ92485 455 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 OSTF1Q92882 214 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 INTS12Q96CB8 462 aaKnown RBP10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 KLHL15Q96M94 604 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 ANKRD27Q96NW4 1050 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms