RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 SLC38A2Q96QD8 506 aa9.28□□□□□ -0.92
SNF8-207ENST00000509995 LACRTQ9GZZ8 138 aa9.28□□□□□ -0.92
SNF8-207ENST00000509995 HHATLQ9HCP6 504 aa9.28□□□□□ -0.92
SNF8-207ENST00000509995 ZNF275Q9NSD4 429 aaPredicted RBP9.28□□□□□ -0.92
SNF8-207ENST00000509995 EMC3Q9P0I2 261 aa9.28□□□□□ -0.92
SNF8-207ENST00000509995 OPTCQ9UBM4 332 aa9.28□□□□□ -0.92
SNF8-207ENST00000509995 MRTO4Q9UKD2 239 aaKnown RBP9.28□□□□□ -0.92
SNF8-207ENST00000509995 NUP50Q9UKX7 468 aa9.28□□□□□ -0.92
SNF8-207ENST00000509995 FAM95CA0A1B0GW59 222 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 K7EPI3 171 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 PPIHO43447 177 aaKnown RBP9.27□□□□□ -0.93
SNF8-207ENST00000509995 PLOD3O60568 738 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 GUCY1B2O75343 617 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 NGFP01138 241 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 SELEP16581 610 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 NPR2P20594 1047 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 COL8A2P25067 703 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 SLC7A1P30825 629 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 PSMD4P55036 377 aaKnown RBP9.27□□□□□ -0.93
SNF8-207ENST00000509995 TMEM33P57088 247 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 POU3F1Q03052 451 aaPredicted RBP9.27□□□□□ -0.93
SNF8-207ENST00000509995 C2orf68Q2NKX9 166 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 ARMCX4Q5H9R4 360 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 SPANXN3Q5MJ09 141 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 C9orf135Q5VTT2 229 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 LIPJQ5W064 366 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 GALNT18Q6P9A2 607 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 KLHL24Q6TFL4 600 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 PAGE2Q7Z2X7 111 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 VSTM4Q8IW00 320 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 CCDC170Q8IYT3 715 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 GATSQ8NAP1 163 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 SLC16A11Q8NCK7 471 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 RNF214Q8ND24 703 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 NUP37Q8NFH4 326 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 OR7G2Q8NG99 324 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 OR52E4Q8NGH9 312 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 WDR20Q8TBZ3 569 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 CKAP2Q8WWK9 683 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 RDH5Q92781 318 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 EXT2Q93063 718 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 SH3YL1Q96HL8 342 aaPredicted RBP9.27□□□□□ -0.93
SNF8-207ENST00000509995 SERPINI1Q99574 410 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 MRPL1Q9BYD6 325 aaKnown RBP9.27□□□□□ -0.93
SNF8-207ENST00000509995 Q9N2J8 555 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 PPANQ9NQ55 473 aaKnown RBP9.27□□□□□ -0.93
SNF8-207ENST00000509995 PFDN4Q9NQP4 134 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 PLEK2Q9NYT0 353 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 DCTN4Q9UJW0 460 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 UTS2RQ9UKP6 389 aa9.27□□□□□ -0.93
SNF8-207ENST00000509995 NOSIPQ9Y314 301 aaKnown RBP9.27□□□□□ -0.93
SNF8-207ENST00000509995 IGKV3D-15A0A087WSY6 115 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 A0A1W2PNR3 127 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 CLPSL1A2RUU4 121 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 ZNF195O14628 629 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 FRS3O43559 492 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 COQ9O75208 318 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 SEC14L2O76054 403 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 SLITRK5O94991 958 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 HPXP02790 462 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 S100BP04271 92 aaPredicted RBP9.26□□□□□ -0.93
SNF8-207ENST00000509995 ALDH9A1P49189 494 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 NAAAQ02083 359 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 DOC2BQ14184 412 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 CPSF6Q16630 551 aaKnown RBP eCLIP9.26□□□□□ -0.93
SNF8-207ENST00000509995 ABLIM2Q6H8Q1 611 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 ATP6V1C2Q8NEY4 427 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 OR4F15Q8NGB8 312 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 TRPC4APQ8TEL6 797 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 UBTD2Q8WUN7 234 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 YIPF5Q969M3 257 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 RAB39BQ96DA2 213 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 ANKRD27Q96NW4 1050 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 FN3KRPQ9HA64 309 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 SENP1Q9P0U3 644 aa9.26□□□□□ -0.93
SNF8-207ENST00000509995 TET2Q6N021 2002 aaPredicted RBP9.26□□□□□ -0.93
SNF8-207ENST00000509995 CCDC151A5D8V7 595 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 C5orf63A6NC05 138 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 FAM181BA6NEQ2 426 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 NDUFA7O95182 113 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 WISP3O95389 354 aaPredicted RBP9.25□□□□□ -0.93
SNF8-207ENST00000509995 OXSR1O95747 527 aaPredicted RBP9.25□□□□□ -0.93
SNF8-207ENST00000509995 CALCRP30988 508 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 NTF4P34130 210 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 THBS4P35443 961 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 PRIM2P49643 509 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 RELBQ01201 579 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 TGFBR3Q03167 851 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 SELENBP1Q13228 472 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 COMMD6Q7Z4G1 85 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 ZC3HC1Q86WB0 502 aaKnown RBP9.25□□□□□ -0.93
SNF8-207ENST00000509995 ZNF527Q8NB42 609 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 FBXO27Q8NI29 283 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 POP5Q969H6 163 aaKnown RBP9.25□□□□□ -0.93
SNF8-207ENST00000509995 TM4SF18Q96CE8 201 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 POPDC3Q9HBV1 291 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 AURKAIP1Q9NWT8 199 aaPredicted RBP9.25□□□□□ -0.93
SNF8-207ENST00000509995 OXSMQ9NWU1 459 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 ZKSCAN5Q9Y2L8 839 aa9.25□□□□□ -0.93
SNF8-207ENST00000509995 PSAT1Q9Y617 370 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms