RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 PPCDCQ96CD2 204 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 MSI2Q96DH6 328 aaKnown RBP9.13□□□□□ -0.95
MBD4-208ENST00000509828 FBXO17Q96EF6 278 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 OTUB1Q96FW1 271 aaPredicted RBP9.13□□□□□ -0.95
MBD4-208ENST00000509828 MS4A4EQ96PG1 132 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 KCNA7Q96RP8 456 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 PAFAH2Q99487 392 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 VRK1Q99986 396 aaPredicted RBP9.13□□□□□ -0.95
MBD4-208ENST00000509828 PSD2Q9BQI7 771 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 HOXD1Q9GZZ0 328 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 ADAM19Q9H013 955 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 BCO1Q9HAY6 547 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 SH3BP4Q9P0V3 963 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 NTMQ9P121 344 aa9.13□□□□□ -0.95
MBD4-208ENST00000509828 SULT2B1O00204 365 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 NDUFS8O00217 210 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 WIPF1O43516 503 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 EFNA2O43921 213 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 SNRPAP09012 282 aaKnown RBP9.12□□□□□ -0.95
MBD4-208ENST00000509828 TFPIP10646 304 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 ACP2P11117 423 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 APOBEC3AP31941 199 aaPredicted RBP9.12□□□□□ -0.95
MBD4-208ENST00000509828 NR4A2P43354 598 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 SUMO3P55854 103 aaPredicted RBP9.12□□□□□ -0.95
MBD4-208ENST00000509828 CSNK2A1P68400 391 aaPredicted RBP9.12□□□□□ -0.95
MBD4-208ENST00000509828 SPOCK1Q08629 439 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 CD226Q15762 336 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 DUSP5Q16690 384 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 CR1LQ2VPA4 569 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 UBAP2Q5T6F2 1119 aaKnown RBP9.12□□□□□ -0.95
MBD4-208ENST00000509828 FBXW9Q5XUX1 488 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 OR7E24Q6IFN5 339 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 ANKRD26P1Q6NSI1 321 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 SEZ6L2Q6UXD5 910 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 SLC46A3Q7Z3Q1 461 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 ZAR1Q86SH2 424 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 RFLNBQ8N5W9 214 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 TOR1AIP2Q8NFQ8 470 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 CIDECQ96AQ7 238 aaPredicted RBP9.12□□□□□ -0.95
MBD4-208ENST00000509828 ZHX1-C8orf76Q96EF9 292 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 C16orf58Q96GQ5 468 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 MRGPRX4Q96LA9 322 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 TMEM237Q96Q45 408 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 ZNF300Q96RE9 604 aaPredicted RBP9.12□□□□□ -0.95
MBD4-208ENST00000509828 KCNS3Q9BQ31 491 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 BTBD2Q9BX70 525 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 PLA2G12AQ9BZM1 189 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 OCEL1Q9H607 264 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 ASB6Q9NWX5 421 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 SIRT5Q9NXA8 310 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 NINJ2Q9NZG7 142 aa9.12□□□□□ -0.95
MBD4-208ENST00000509828 NOSIPQ9Y314 301 aaKnown RBP9.12□□□□□ -0.95
MBD4-208ENST00000509828 ZNF724A8MTY0 619 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 CYTIPO60759 359 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 MRPL33O75394 65 aaKnown RBP9.11□□□□□ -0.95
MBD4-208ENST00000509828 PGM3O95394 542 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 IFI6P09912 130 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 DDX5P17844 614 aaKnown RBP9.11□□□□□ -0.95
MBD4-208ENST00000509828 MAGEA12P43365 314 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 SNRPD2P62316 118 aaKnown RBP9.11□□□□□ -0.95
MBD4-208ENST00000509828 SLC7A5Q01650 507 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 CBFBQ13951 182 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 TOMM34Q15785 309 aaPredicted RBP9.11□□□□□ -0.95
MBD4-208ENST00000509828 SPDYE7PQ495Y7 208 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 CFAP157Q5JU67 520 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 CDC73Q6P1J9 531 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 ZCCHC12Q6PEW1 402 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 KLHL24Q6TFL4 600 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 CBLN3Q6UW01 205 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 ZNF540Q8NDQ6 660 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 GPR119Q8TDV5 335 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 ADAMTS15Q8TE58 950 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 CDS1Q92903 461 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 EGLN2Q96KS0 407 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 FOXN4Q96NZ1 517 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 KLHDC3Q9BQ90 382 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 COQ10BQ9H8M1 238 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 ZCCHC3Q9NUD5 404 aaKnown RBP9.11□□□□□ -0.95
MBD4-208ENST00000509828 UPB1Q9UBR1 384 aa9.11□□□□□ -0.95
MBD4-208ENST00000509828 FAF1Q9UNN5 650 aaPredicted RBP9.11□□□□□ -0.95
MBD4-208ENST00000509828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.11□□□□□ -0.956e-12■■□□□ 11.8
MBD4-208ENST00000509828 PRR14LQ5THK1 2151 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 ALPK2Q86TB3 2170 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 NPIPA5A0A0B4J1W7 369 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 LOC390937A0A1W2PQ73 354 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 SERTM1A2A2V5 107 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 NPIPA7E9PJI5 369 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 GPR171O14626 319 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 SMAD9O15198 467 aaKnown RBP9.1□□□□□ -0.95
MBD4-208ENST00000509828 OIP5O43482 229 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 RSL1D1O76021 490 aaKnown RBP9.1□□□□□ -0.95
MBD4-208ENST00000509828 SBK3P0C264 359 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 NPIPA8P0DM63 369 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 PRKCAP17252 672 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 ITGA2P17301 1181 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 COX5AP20674 150 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 CFPP27918 469 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 PRKAA2P54646 552 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 PHC1P78364 1004 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 MERTKQ12866 999 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms