RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 GPNMBQ14956 572 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 EFNB3Q15768 340 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 PTGISQ16647 500 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 NDUFA9Q16795 377 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 DPCR1Q3MIW9 517 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 ZBED5Q49AG3 693 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 PPM1LQ5SGD2 360 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 DNLZQ5SXM8 178 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 LRIF1Q5T3J3 769 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 OR2G6Q5TZ20 316 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 SYPL2Q5VXT5 272 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 ABLIM2Q6H8Q1 611 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 UGT3A1Q6NUS8 523 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 LPCAT3Q6P1A2 487 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 SLC39A4Q6P5W5 647 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 EMBQ6PCB8 327 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 PRSS55Q6UWB4 352 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 SPNS3Q6ZMD2 512 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 CYS1Q717R9 158 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 MED25Q71SY5 747 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 PIGWQ7Z7B1 504 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 ISCA2Q86U28 154 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 LDB1Q86U70 411 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 GPBP1Q86WP2 473 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 CACUL1Q86Y37 369 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 CALHM1Q8IU99 346 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 PLXDC1Q8IUK5 500 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 ERI1Q8IV48 349 aaKnown RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 FUNDC1Q8IVP5 155 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 APCDD1Q8J025 514 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 C1orf87Q8N0U7 546 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 LGI2Q8N0V4 545 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 MTURNQ8N3F0 131 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 SVOPLQ8N434 492 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 MARVELD2Q8N4S9 558 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 CDYL2Q8N8U2 506 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 OR13C5Q8NGS8 318 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 OR11L1Q8NGX0 322 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 OR4K15Q8NH41 348 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 OR56A3Q8NH54 315 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 TRMT10AQ8TBZ6 339 aaKnown RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 SNX33Q8WV41 574 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 ACOT11Q8WXI4 607 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 FCGR1BQ92637 280 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 RPL36ALQ969Q0 106 aaKnown RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 TMEM45BQ96B21 275 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 TM4SF19Q96DZ7 209 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 ELMOD3Q96FG2 381 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 COQ2Q96H96 371 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 HARBI1Q96MB7 349 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 SFXN2Q96NB2 322 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 IL12RB2Q99665 862 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 SLC35A5Q9BS91 424 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 TRAF4Q9BUZ4 470 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 SCNM1Q9BWG6 230 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 GTPBP2Q9BX10 602 aaKnown RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 NMNAT2Q9BZQ4 307 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 NUAK2Q9H093 628 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 C1orf198Q9H425 327 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 ESRP2Q9H6T0 727 aaKnown RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 SMYD3Q9H7B4 428 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 PPP1R3EQ9H7J1 279 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 NT5DC2Q9H857 520 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 ANKZF1Q9H8Y5 726 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 NIT2Q9NQR4 276 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 PXMP2Q9NR77 195 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 BABAM2Q9NXR7 383 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 GLTPQ9NZD2 209 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 TMEM9Q9P0T7 183 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 KCNG2Q9UJ96 466 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 ZDHHC8Q9ULC8 765 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 FLVCR2Q9UPI3 526 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 TMEM184BQ9Y519 407 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 PCDHA13Q9Y5I0 950 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 TSSC4Q9Y5U2 329 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-206ENST00000509429 PIK3C2AO00443 1686 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 LMO7Q8WWI1 1683 aa4.16□□□□□ -1.74
NIPBL-206ENST00000509429 FLT4P35916 1363 aa4.15□□□□□ -1.74
NIPBL-206ENST00000509429 OVOS2A0A0G2JMS6 1433 aa4.15□□□□□ -1.74
NIPBL-206ENST00000509429 USP6P35125 1406 aa4.15□□□□□ -1.74
NIPBL-206ENST00000509429 CRB1P82279 1406 aa4.15□□□□□ -1.74
NIPBL-206ENST00000509429 VPS37CA5D8V6 355 aaPredicted RBP4.15□□□□□ -1.75
NIPBL-206ENST00000509429 SAGE2PA6NJ88 616 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 FAM90A8PA6NJQ4 464 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 FAM171A2A8MVW0 826 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 TRDCB7Z8K6 153 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 G3V2T6 193 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 TMX2-CTNND1H3BSU7 103 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 TRAFD1O14545 582 aaPredicted RBP4.15□□□□□ -1.75
NIPBL-206ENST00000509429 RAB29O14966 203 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 INPP4BO15327 924 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 NDUFS4O43181 175 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 ADAM12O43184 909 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 PSTPIP1O43586 416 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 STC2O76061 302 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 CCNE2O96020 404 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 FGGP02679 453 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 JUNP05412 331 aaKnown RBP4.15□□□□□ -1.75
NIPBL-206ENST00000509429 FAM90A13PP0C7W8 464 aa4.15□□□□□ -1.75
NIPBL-206ENST00000509429 FAM90A24PP0C7X0 464 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms