RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 RAB39BQ96DA2 213 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 IQCDQ96DY2 449 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PTCD3Q96EY7 689 aaKnown RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 CMTM7Q96FZ5 175 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 SLC35A4Q96G79 324 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 ARL5BQ96KC2 179 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 CCDC42Q96M95 316 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 BBS4Q96RK4 519 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 NDNQ99608 321 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 EFCAB11Q9BUY7 163 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 KIFC1Q9BW19 673 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 GATA5Q9BWX5 397 aaPredicted RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 SORBS1Q9BX66 1292 aaKnown RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 TBL1XR1Q9BZK7 514 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 NAT10Q9H0A0 1025 aaKnown RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 MS4A5Q9H3V2 200 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 TMEM185BQ9H7F4 350 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 ZBTB26Q9HCK0 441 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 HHATLQ9HCP6 504 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 TNFRSF12AQ9NP84 129 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PFDN4Q9NQP4 134 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 TNFRSF19Q9NS68 423 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 CA10Q9NS85 328 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 C19orf73Q9NVV2 129 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 LYARQ9NX58 379 aaKnown RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 MKS1Q9NXB0 559 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 KLHL9Q9P2J3 617 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 MRTO4Q9UKD2 239 aaKnown RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 NUP50Q9UKX7 468 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 CAPN11Q9UMQ6 739 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 RNF114Q9Y508 228 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 SLC25A15Q9Y619 301 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PLCE1Q9P212 2302 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 A0A087WZY1 265 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 A0A0J9YW62 118 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 TCRBV5S2A0A599 114 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 MAGEB16A2A368 324 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 C5orf63A6NC05 138 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 NCF1BA6NI72 391 aaPredicted RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 SMTNL1A8MU46 457 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 NCF1CA8MVU1 366 aaPredicted RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 CLDN34H7C241 214 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 CCDC188H7C350 402 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 hCG_2039718K7EN88 272 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 FOXE1O00358 373 aaPredicted RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 PIP5K1BO14986 540 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 TO15178 435 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ADAMDEC1O15204 470 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ERAL1O75616 437 aaKnown RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 BCAS2O75934 225 aaPredicted RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 HAUS5O94927 633 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 IGHV3-9P01782 118 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ADRA2AP08913 450 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 FAM58BPP0C7Q3 252 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 CPMP14384 443 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 NCF1P14598 390 aaPredicted RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 RAC2P15153 192 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 SELEP16581 610 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ZNF17P17021 662 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 NPR2P20594 1047 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ACHEP22303 614 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 GNALP38405 381 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 GDF5P43026 501 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 RAD52P43351 418 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 MAGEA1P43355 309 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 RFX3P48380 749 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 MARCKSL1P49006 195 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 HNMTP50135 292 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ZNF41P51814 821 aaPredicted RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 PRPS1P60891 318 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 PHEXP78562 749 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 BASP1P80723 227 aaKnown RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 COL10A1Q03692 680 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 C17orf67Q0P5P2 114 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 MORF4L2Q15014 288 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ERCC6LQ2NKX8 1250 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 KHDRBS2Q5VWX1 349 aaKnown RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 ANKRD22Q5VYY1 191 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 FBXW9Q5XUX1 488 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 REP15Q6BDI9 236 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 MED27Q6P2C8 311 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 FAM111BQ6SJ93 734 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 MARCH3Q86UD3 253 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 GGNQ86UU5 652 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 MYLK4Q86YV6 388 aaPredicted RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 SLC44A2Q8IWA5 706 aaPredicted RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 LMNTD2Q8IXW0 634 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ZCCHC24Q8N2G6 241 aaKnown RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 FADS6Q8N9I5 356 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 NOA1Q8NC60 698 aaKnown RBP3.33□□□□□ -1.88
RNF4-211ENST00000509206 ATP6V1C2Q8NEY4 427 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 RDH5Q92781 318 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ARL8AQ96BM9 186 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 C16orf92Q96LL3 132 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 KLHL15Q96M94 604 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ANKRD27Q96NW4 1050 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 SERPINB12Q96P63 405 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 LRRC1Q9BTT6 524 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 MS4A8Q9BY19 250 aa3.33□□□□□ -1.88
RNF4-211ENST00000509206 ZNF717Q9BY31 904 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms