RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CNOT4O95628 575 aaKnown RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 PGCP20142 388 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 IL32P24001 234 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 ETV4P43268 484 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 ANXA11P50995 505 aaKnown RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 CLNS1AP54105 237 aaKnown RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 ABCE1P61221 599 aaKnown RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 CSNK2A1P68400 391 aaPredicted RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 HBA1P69905 142 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 ZNF141Q15928 474 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 TMEM176BQ3YBM2 270 aaPredicted RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 ANKRD34AQ69YU3 496 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 CBLN3Q6UW01 205 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 CLEC9AQ6UXN8 241 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 ZNF704Q6ZNC4 412 aaPredicted RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 EIF3MQ7L2H7 374 aaKnown RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 C16orf62Q7Z3J2 963 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 KRTCAP2Q8N6L1 136 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 TMCO5AQ8N6Q1 288 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 ZNF611Q8N823 705 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 ZNF614Q8N883 585 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 MIPOL1Q8TD10 442 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 SLC25A43Q8WUT9 341 aaPredicted RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 OTUB1Q96FW1 271 aaPredicted RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 SLC35G5Q96KT7 338 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 DPY30Q9C005 99 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 ESRP2Q9H6T0 727 aaKnown RBP12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 SLC35A3Q9Y2D2 325 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 RAP2CQ9Y3L5 183 aa12.13□□□□□ -0.47
CCHCR1-227ENST00000508852 NAV3Q8IVL0 2385 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 RNF103-CHMP3A0A140T963 221 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 HS3ST1O14792 307 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 DNAJA2O60884 412 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 NTN1O95631 604 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 OPN1LWP04000 364 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 HEXAP06865 529 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 THBDP07204 575 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 NID1P14543 1247 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 HOXB4P17483 251 aaPredicted RBP12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 ENPP1P22413 925 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 UQCRC2P22695 453 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 LOXP28300 417 aaPredicted RBP12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 RPL14P50914 215 aaKnown RBP12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 LTBQ06643 244 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 QPRTQ15274 297 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 KRT71Q3SY84 523 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 AP1ARQ63HQ0 302 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 ADAM5Q6NVV9 412 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 YTHDF3Q7Z739 585 aaKnown RBP12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 TRIML2Q8N7C3 387 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 OR4A15Q8NGL6 344 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 ROBO4Q8WZ75 1007 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 KISS1RQ969F8 398 aaPredicted RBP12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 TESCQ96BS2 214 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 ZHX1-C8orf76Q96EF9 292 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 PLPPR2Q96GM1 343 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 TMEM204Q9BSN7 226 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 C12orf49Q9H741 205 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 BCO1Q9HAY6 547 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 GIMAP2Q9UG22 337 aa12.12□□□□□ -0.47
CCHCR1-227ENST00000508852 ZNF724A8MTY0 619 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 DNPH1O43598 174 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 CSTAP01040 98 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 APOBEC1P41238 236 aaKnown RBP12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 CLK1P49759 484 aaKnown RBP12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 CCR4P51679 360 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 HPCAP84074 193 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 ITGADQ13349 1161 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 GPR68Q15743 365 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 CHI3L2Q15782 390 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 ETFDHQ16134 617 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 PDZK1Q5T2W1 519 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 HEPHL1Q6MZM0 1159 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 TFAP2EQ6VUC0 442 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 Q6ZT83 130 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 P2RY8Q86VZ1 359 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 WFDC8Q8IUA0 241 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 KRTAP1-3Q8IUG1 177 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 TUSC5Q8IXB3 177 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 GABRG1Q8N1C3 465 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 OR5AK3PQ8NH89 298 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 RFWD2Q8NHY2 731 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 ABHD3Q8WU67 409 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 PMM1Q92871 262 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 COX4I2Q96KJ9 171 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 NPAS1Q99742 590 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 POTEKPQ9BYX7 375 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 ZNF350Q9GZX5 532 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 GSX1Q9H4S2 264 aaPredicted RBP12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 AKTIPQ9H8T0 292 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 EMC3Q9P0I2 261 aa12.11□□□□□ -0.47
CCHCR1-227ENST00000508852 CYTIPO60759 359 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 GCM2O75603 506 aaPredicted RBP12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 CD3EP07766 207 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 LBPP18428 481 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 ARRB2P32121 409 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 MAGEA8P43361 318 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms