RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 MPZL2O60487 215 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 SLC19A2O60779 497 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 INHAP05111 366 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 IRF1P10914 325 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 PRPS2P11908 318 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 CPT2P23786 658 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 F2RL1P55085 397 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 HSD17B7P56937 341 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 TBX4P57082 545 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 CLDN2P57739 230 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 TAS2R50P59544 299 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 ACTR1AP61163 376 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 SNRPGP62308 76 aaKnown RBP6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 VEZF1Q14119 521 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 GPRC6AQ5T6X5 926 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 MEDAGQ5VYS4 303 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 RNLSQ5VYX0 342 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 ZNF280BQ86YH2 543 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 CCDC117Q8IWD4 279 aaPredicted RBP6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 SVBPQ8N300 66 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 FAM24BQ8N5W8 94 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 POGLUT1Q8NBL1 392 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 ZNF740Q8NDX6 193 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 OR5T2Q8NGG2 359 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 TMED6Q8WW62 240 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 SLC25A38Q96DW6 304 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 TCEAL4Q96EI5 215 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 TMEM19Q96HH6 336 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 IP6K3Q96PC2 410 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 FNDC11Q9BVV2 318 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 RHBGQ9H310 441 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 LRRN3Q9H3W5 708 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 SGK2Q9HBY8 427 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 KRCC1Q9NPI7 259 aaPredicted RBP6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 CRLS1Q9UJA2 301 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 A0A0U1RQF3 1178 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 A0A1W2PPH5 198 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ACOD1A6NK06 481 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 OR2AG2A6NM03 316 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 TERTO14746 1132 aaKnown RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 PAK4O96013 591 aaPredicted RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ANXA5P08758 320 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ACP2P11117 423 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 PBLDP30039 288 aaPredicted RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 MRPL19P49406 292 aaKnown RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 DGKGP49619 791 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 NFATC4Q14934 902 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 TP53I3Q53FA7 332 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ACSM3Q53FZ2 586 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 GFI1BQ5VTD9 330 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 CLEC9AQ6UXN8 241 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 SLC9B2Q86UD5 537 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 FOXRED2Q8IWF2 684 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 KLHDC8BQ8IXV7 354 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 OR6T1Q8NGN1 323 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 C1orf216Q8TAB5 229 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ARL5BQ96KC2 179 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 UFSP2Q9NUQ7 469 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 OPN4Q9UHM6 478 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 NYNRINQ9P2P1 1898 aaKnown RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 TMEM272A0A1B0GTI8 110 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 FGF10O15520 208 aaPredicted RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ADAM12O43184 909 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 SLC28A2O43868 658 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 PIPP12273 146 aaPredicted RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 PRF1P14222 555 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 CD1CP29017 333 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 AVPR2P30518 371 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 PCGF2P35227 344 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 SCNN1AP37088 669 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 SGSHP51688 502 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 PNLIPRP2P54317 469 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 RAB5BP61020 215 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 RPP30P78346 268 aaKnown RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 SRSF11Q05519 484 aaKnown RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 SERINC3Q13530 473 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 DYRK1AQ13627 763 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 KLF9Q13886 244 aaPredicted RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 HBMQ6B0K9 141 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 RHOUQ7L0Q8 258 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 MAMDC2Q7Z304 686 aaPredicted RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 C12orf40Q86WS4 652 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 SLITRK4Q8IW52 837 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 CARNMT1Q8N4J0 409 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ARRDC1Q8N5I2 433 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ZBTB2Q8N680 514 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 OR51S1Q8NGJ8 323 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ABHD4Q8TB40 342 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ST7LQ8TDW4 575 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 CMTM7Q96FZ5 175 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 OR14A2Q96R54 314 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 CHST8Q9H2A9 424 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 NPDC1Q9NQX5 325 aaPredicted RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 C1GALT1Q9NS00 363 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 H2AFY2Q9P0M6 372 aaPredicted RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 ZNF629Q9UEG4 869 aaPredicted RBP6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 STRCQ7RTU9 1775 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 VPS13AQ96RL7 3174 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 WDR87Q6ZQQ6 2873 aa6.75□□□□□ -1.33
LIMCH1-207ENST00000508466 A0A0B4J2A0 478 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms