RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 NPIPA3F8WFD2 350 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 H7C1Q1 480 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 SLC28A1O00337 649 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 ADAM10O14672 748 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 PIP5K1BO14986 540 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 CTIFO43310 598 aaKnown RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 RGS14O43566 566 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 TYROBPO43914 113 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 PEX11AO75192 247 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 LYPLA1O75608 230 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 REM1O75628 298 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 TRAPPC6AO75865 159 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 GLSO94925 669 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 TPOP07202 933 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 BPGMP07738 259 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 ABCB1P08183 1280 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 BCKDHAP12694 445 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 HSD3B1P14060 373 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 ABOP16442 354 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 GPX3P22352 226 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 TCEA1P23193 301 aaKnown RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 ABCD3P28288 659 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 TIA1P31483 386 aaKnown RBP eCLIP4.13□□□□□ -1.75
NUP54-206ENST00000508465 GALNSP34059 522 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 LIPAP38571 399 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 CA7P43166 264 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 MAGEA5P43359 124 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 EMDP50402 254 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 CASP6P55212 293 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 TRA2BP62995 288 aaKnown RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 KCNJ2P63252 427 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 RBPJQ06330 500 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 PMPCAQ10713 525 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 FOXO1Q12778 655 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 SLC10A1Q14973 349 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 KIAA0040Q15053 153 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 EBPQ15125 230 aaKnown RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 TOMM20Q15388 145 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 INAQ16352 499 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 GALNTL6Q49A17 601 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 RFTN2Q52LD8 501 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 SPIN4Q56A73 249 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 SH2D4BQ5SQS7 431 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 CEP85LQ5SZL2 805 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 C6orf163Q5TEZ5 329 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 OR5M10Q6IEU7 315 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 FAM71E1Q6IPT2 247 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 Q6ZSR9 355 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 TICAM1Q8IUC6 712 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 SLC44A2Q8IWA5 706 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 TAGAPQ8N103 731 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 GHDCQ8N2G8 530 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 LRRC25Q8N386 305 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 RPRMLQ8N4K4 120 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 MREGQ8N565 214 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 TMEM251Q8N6I4 163 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 ZNF441Q8N8Z8 693 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 ZFP62Q8NB50 900 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 OR7G2Q8NG99 324 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 OR7G1Q8NGA0 311 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 OR4N2Q8NGD1 307 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 PPP1R35Q8TAP8 253 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 SLC22A8Q8TCC7 542 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 TMBIM1Q969X1 311 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 CIDECQ96AQ7 238 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 COQ8BQ96D53 544 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 SPACA9Q96E40 222 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 OMA1Q96E52 524 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 C11orf24Q96F05 449 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 RITA1Q96K30 269 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 ART5Q96L15 291 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 SGCZQ96LD1 299 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 TSSK3Q96PN8 268 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 PELOQ9BRX2 385 aaKnown RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 FAIM2Q9BWQ8 316 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 ITPAQ9BY32 194 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 TTTY12Q9BZ98 90 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 GLIPR2Q9H4G4 154 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 EXO5Q9H790 373 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 LRTM1Q9HBL6 345 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 GPR35Q9HC97 309 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 SH2D2AQ9NP31 389 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 RRAGDQ9NQL2 400 aaPredicted RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 SACM1LQ9NTJ5 587 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.13□□□□□ -1.75
NUP54-206ENST00000508465 C1orf109Q9NX04 203 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 KLHL13Q9P2N7 655 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 ZNF639Q9UID6 485 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 ACAD8Q9UKU7 415 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 RAB21Q9UL25 225 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 STK38LQ9Y2H1 464 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 DNAJC15Q9Y5T4 150 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 LIPGQ9Y5X9 500 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 NINQ8N4C6 2090 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 SPTAN1Q13813 2472 aaKnown RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 ITPR2Q14571 2701 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 GTF3C1Q12789 2109 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 GXYLT2A0PJZ3 443 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 SYNDIG1LA6NDD5 238 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 CD8B2A6NJW9 211 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms