RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 NOL3O60936 208 aaKnown RBP5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 SDC3O75056 442 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 SLITRK3O94933 977 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 GNA14O95837 355 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 SLC25A27O95847 323 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 CGAP01215 116 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 MSNP26038 577 aaKnown RBP5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 DPP4P27487 766 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 ADRA1AP35348 466 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 CCT6AP40227 531 aaKnown RBP5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 HMGCS2P54868 508 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 SNRPFP62306 86 aaKnown RBP5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 RPS6P62753 249 aaKnown RBP5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 TRA2BP62995 288 aaKnown RBP5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 IL9RQ01113 521 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 EXOSC2Q13868 293 aaKnown RBP5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 VGLL4Q14135 290 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 EIF2B1Q14232 305 aaKnown RBP5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 C17orf58Q2M2W7 97 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 CNPY1Q3B7I2 92 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 LEMD1Q68G75 181 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 SPECC1LQ69YQ0 1117 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 REG3GQ6UW15 175 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 LPCAT2Q7L5N7 544 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 CCDC36Q8IYA8 594 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 NFAM1Q8NET5 270 aaPredicted RBP5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 FAM210AQ96ND0 272 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 CARD6Q9BX69 1037 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 TRIM6Q9C030 488 aaPredicted RBP5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 AMBNQ9NP70 447 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 SH3BGRL2Q9UJC5 107 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 TRAF3IP3Q9Y228 551 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 WDR90Q96KV7 1748 aa5.28□□□□□ -1.56
COL6A4P1-204ENST00000508169 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 STX10O60499 249 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 GALR3O60755 368 aaPredicted RBP5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 GAS8-AS1O95177 125 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 RENP00797 406 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 IGHG3P01860 377 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 KRT6BP04259 564 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 TPM2P07951 284 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 MELTFP08582 738 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 SNRPCP09234 159 aaKnown RBP5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 TNNI3P19429 210 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 ACAA2P42765 397 aaKnown RBP5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 KRT6CP48668 564 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 KRTAP1-1Q07627 177 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 KLHL30Q0D2K2 578 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 FILIP1LQ4L180 1135 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 ZCWPW2Q504Y3 356 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 SEL1L3Q68CR1 1132 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 PNCKQ6P2M8 343 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 CCDC65Q8IXS2 484 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 GCNT2Q8N0V5 402 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 NELFBQ8WX92 580 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 PANX2Q96RD6 677 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 MYCBPQ99417 103 aaPredicted RBP5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 NUP58Q9BVL2 599 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 TEKT3Q9BXF9 490 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 BLZF1Q9H2G9 400 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 SUDS3Q9H7L9 328 aaPredicted RBP5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 PXMP2Q9NR77 195 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 SAMSN1Q9NSI8 373 aaKnown RBP5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 SLC35D1Q9NTN3 355 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 DUS2Q9NX74 493 aaKnown RBP5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 IFNKQ9P0W0 207 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 RCOR3Q9P2K3 495 aaPredicted RBP5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 CGNQ9P2M7 1197 aaKnown RBP5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 RNF24Q9Y225 148 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 PTPRFP10586 1907 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 LOXHD1Q8IVV2 1947 aa5.27□□□□□ -1.57
COL6A4P1-204ENST00000508169 SYNRGQ9UMZ2 1314 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 A0A087WWV3 80 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 A0A1B0GU03 582 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 TRABD2BA6NFA1 517 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 WASH3PC4AMC7 463 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 FAM200BP0CF97 657 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 GSTT2P0CG29 244 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 GSTT2BP0CG30 244 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 CALCBP10092 127 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 THRBP10828 461 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 CASP1P29466 404 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 AXLP30530 894 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 PTGFRP43088 359 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 ARHGDIAP52565 204 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 SNAP25P60880 206 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 ZNF33BQ06732 778 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 ENPEPQ07075 957 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 DMTNQ08495 405 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 NHLRC3Q5JS37 347 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 RIPPLY2Q5TAB7 128 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 LRRC8BQ6P9F7 803 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 WASH2PQ6VEQ5 465 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 MYOCDQ8IZQ8 938 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 FAM133AQ8N9E0 248 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 ZNF485Q8NCK3 441 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 ITLN1Q8WWA0 313 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 ITFG2Q969R8 447 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 WBP1Q96G27 269 aa5.26□□□□□ -1.57
COL6A4P1-204ENST00000508169 VSTM2LQ96N03 204 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms