RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 A0A0U1RQF3 1178 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 BCLAF3A2AJT9 711 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 C2CD4BA6NLJ0 364 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 PP2D1A8MPX8 630 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 H3BN98 237 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 H3BNH8 94 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 TEX46H3BTG2 121 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 PDHXO00330 501 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 TRAFD1O14545 582 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 DVL1O14640 695 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 EIF3HO15372 352 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 BUD23O43709 281 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ATP6AP2O75787 350 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 VAPBO95292 243 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 SNAPINO95295 136 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 SERPINE2P07093 398 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 FGF2P09038 288 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 MBL2P11226 248 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ATP1B2P14415 290 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 CPN1P15169 458 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ITGA2P17301 1181 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 TSPAN8P19075 237 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 IMPDH1P20839 514 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 CRABP2P29373 138 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 PRDX3P30048 256 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 BDKRB2P30411 391 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ACVR1BP36896 505 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 MAGEA12P43365 314 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 NOVA1P51513 510 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 DNA2P51530 1060 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 EFNB2P52799 333 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ATP1B3P54709 279 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 CKAP4Q07065 602 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ZFP36L1Q07352 338 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 CYP24A1Q07973 514 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 SMARCB1Q12824 385 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 NAB1Q13506 487 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 KPNB1Q14974 876 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 EXOSC7Q15024 291 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 SPHARQ15513 63 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 INPP5JQ15735 1006 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 KYAT1Q16773 422 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 PRTGQ2VWP7 1150 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 KRTAP27-1Q3LI81 207 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 COX19Q49B96 90 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ALG10Q5BKT4 473 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 PDZD11Q5EBL8 140 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ALG10BQ5I7T1 473 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 SAMD4BQ5PRF9 694 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 MANEAQ5SRI9 462 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 SDHAF4Q5VUM1 108 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 METTL21CQ5VZV1 264 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 FRG2Q64ET8 278 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 C22orf42Q6IC83 251 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 CAPN13Q6MZZ7 669 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 RGMBQ6NW40 437 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 HSDL2Q6YN16 418 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 USP43Q70EL4 1123 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 PRUNE1Q86TP1 453 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 SERPINA11Q86U17 422 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 RANBP3LQ86VV4 465 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 GID4Q8IVV7 300 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 SFTPA2Q8IWL1 248 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 BBS7Q8IWZ6 715 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ZBED8Q8IZ13 594 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 DCP1BQ8IZD4 617 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 TDHQ8IZJ6 230 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 CENPSQ8N2Z9 138 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ELMOD1Q8N336 334 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 METTL4Q8N3J2 472 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 SPATA6LQ8N4H0 392 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 PAQR4Q8N4S7 273 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 SLC5A8Q8N695 610 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 C8orf31Q8N9H6 132 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 THAP8Q8NA92 274 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR4N2Q8NGD1 307 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR4K1Q8NGD4 311 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR10A7Q8NGE5 316 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR5B17Q8NGF7 314 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR5M8Q8NGP6 311 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR6K2Q8NGY2 324 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR5AK3PQ8NH89 298 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 PHOSPHO2Q8TCD6 241 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 LGALS14Q8TCE9 139 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ZNF473Q8WTR7 871 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 CA5BP1Q8WTZ4 195 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 NELFBQ8WX92 580 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 CACNG8Q8WXS5 425 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 C22orf15Q8WYQ4 148 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 TM9SF4Q92544 642 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 OMA1Q96E52 524 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 KAZALD1Q96I82 304 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 RNF145Q96MT1 663 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 DEFB118Q96PH6 123 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 S1PR3Q99500 378 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 EBNA1BP2Q99848 306 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 P2RY13Q9BPV8 354 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 UTP23Q9BRU9 249 aaKnown RBP3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 DUSP16Q9BY84 665 aa3.24□□□□□ -1.89
HMGB3P15-201ENST00000507326 ING2Q9H160 280 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms