RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 DDCP20711 480 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 IGHV1-2P23083 117 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 HSD3B2P26439 372 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 PHBP35232 272 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 HSD17B3P37058 310 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 PDLIM4P50479 330 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 MANFP55145 182 aaKnown RBP5.08□□□□□ -1.6
GYPB-208ENST00000507009 SLC7A5Q01650 507 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 GUCY2DQ02846 1103 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 ZNF763Q0D2J5 394 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 RASGEF1BQ0VAM2 473 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 SLC29A2Q14542 456 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 MLC1Q15049 377 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 RASA2Q15283 850 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 CD226Q15762 336 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 TSNAXIP1Q2TAA8 658 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 CR1LQ2VPA4 569 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 VPS26BQ4G0F5 336 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 GLE1Q53GS7 698 aaKnown RBP5.08□□□□□ -1.6
GYPB-208ENST00000507009 UNC50Q53HI1 259 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 C11orf71Q6IPW1 123 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 KLHL17Q6TDP4 642 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 SEZ6L2Q6UXD5 910 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 TMEM108Q6UXF1 575 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 LRIG3Q6UXM1 1119 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 Q6ZSR9 355 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 Q6ZT83 130 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 TRABD2AQ86V40 505 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 OR2L13Q8N349 312 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 COX18Q8N8Q8 333 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 NUP43Q8NFH3 380 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 CIDECQ96AQ7 238 aaPredicted RBP5.08□□□□□ -1.6
GYPB-208ENST00000507009 MSI2Q96DH6 328 aaKnown RBP5.08□□□□□ -1.6
GYPB-208ENST00000507009 FBXO17Q96EF6 278 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 AMDHD1Q96NU7 426 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 OR5B2Q96R09 309 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 VRK1Q99986 396 aaPredicted RBP5.08□□□□□ -1.6
GYPB-208ENST00000507009 DHRS9Q9BPW9 319 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 PIMREGQ9BSJ6 248 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 LMF2Q9BU23 707 aaKnown RBP5.08□□□□□ -1.6
GYPB-208ENST00000507009 TRMOQ9BU70 441 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 ADAM19Q9H013 955 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 MRPL46Q9H2W6 279 aaKnown RBP5.08□□□□□ -1.6
GYPB-208ENST00000507009 MYNNQ9NPC7 610 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 TMEM160Q9NX00 188 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 KLHL9Q9P2J3 617 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 CARD8Q9Y2G2 431 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 TRAF6Q9Y4K3 522 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 PMF1-BGLAPU3KQ54 211 aa5.08□□□□□ -1.6
GYPB-208ENST00000507009 CADP27708 2225 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 MALRD1Q5VYJ5 2156 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 IGHV4-61A0A0C4DH41 118 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 C7orf72A4D263 438 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 LRP5LA4QPB2 252 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 OR5H1A6NKK0 313 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 GJE1A6NN92 205 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 TRIM49D1C9J1S8 452 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 PDPK1O15530 556 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 KCNAB3O43448 404 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 EFNA2O43921 213 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 CRCPO75575 148 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 KCNK2O95069 426 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 PGRP06401 933 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 ALOX5P09917 674 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 LINGO3P0C6S8 592 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 DHRS4L1P0CG22 281 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 TFPIP10646 304 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 CDH2P19022 906 aaPredicted RBP5.07□□□□□ -1.6
GYPB-208ENST00000507009 TAC1P20366 129 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 ATP6V1C1P21283 382 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 PSMA4P25789 261 aaKnown RBP5.07□□□□□ -1.6
GYPB-208ENST00000507009 CD40P25942 277 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 OR3A2P47893 321 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 EFNA4P52798 201 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 ACTG1P63261 375 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 CAV1Q03135 178 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 ZNF117Q03924 483 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 CHRNB3Q05901 458 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 SQLEQ14534 574 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 TOMM34Q15785 309 aaPredicted RBP5.07□□□□□ -1.6
GYPB-208ENST00000507009 DUSP5Q16690 384 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 TIMM23BQ5SRD1 257 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 ZNF678Q5SXM1 525 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 FAM71E1Q6IPT2 247 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 CDC73Q6P1J9 531 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 CBLN3Q6UW01 205 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 ZDHHC24Q6UX98 284 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 RINLQ6ZS11 566 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 SLC46A3Q7Z3Q1 461 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 LSRQ86X29 649 aaPredicted RBP5.07□□□□□ -1.6
GYPB-208ENST00000507009 TDRPQ86YL5 185 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 ALDH16A1Q8IZ83 802 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 SLC43A2Q8N370 569 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 CCNYL1Q8N7R7 359 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.07□□□□□ -1.6
GYPB-208ENST00000507009 ANKS4BQ8N8V4 417 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 SLC16A11Q8NCK7 471 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 CLHC1Q8NHS4 586 aa5.07□□□□□ -1.6
GYPB-208ENST00000507009 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.07□□□□□ -1.6
GYPB-208ENST00000507009 FAM110BQ8TC76 370 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms