RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 OR51I1Q9H343 314 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 TMEM185BQ9H7F4 350 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 COQ10BQ9H8M1 238 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 POLE3Q9NRF9 147 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 PLSCR4Q9NRQ2 329 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 GLRX2Q9NS18 164 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 CCM2LQ9NUG4 571 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 MCTS1Q9ULC4 181 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 PCDHGB4Q9UN71 923 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 PROCRQ9UNN8 238 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 GPR45Q9Y5Y3 372 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 C2CD3Q4AC94 2353 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 PRAMEF27A3QJZ7 478 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 TRPC5OSA6NMA1 111 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 DEFB108AA8MXU0 73 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 GTPBP1O00178 669 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 KLF11O14901 512 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF264O43296 627 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 ERLIN1O75477 346 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 STX11O75558 287 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 CPSF4O95639 269 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 AGR2O95994 175 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 C1QCP02747 245 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 OR12D1P0DN82 309 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 UBL4AP11441 157 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 POU2F1P14859 743 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 CRYGSP22914 178 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 EPHA3P29320 983 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 S100A3P33764 101 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 UGT2B10P36537 528 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 PLAURQ03405 335 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 GPR68Q15743 365 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 MAPK14Q16539 360 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF239Q16600 458 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 PDSS1Q5T2R2 415 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 ATG16L1Q676U5 607 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 TYW3Q6IPR3 259 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 TNFAIP8L2Q6P589 184 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 FRRS1Q6ZNA5 592 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 C22orf34Q6ZV56 151 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 MAVSQ7Z434 540 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF614Q8N883 585 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 RNF128Q8TEB7 428 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 OSTF1Q92882 214 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 RAB8BQ92930 207 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 ALPK1Q96QP1 1244 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 SLC39A3Q9BRY0 314 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 SRXN1Q9BYN0 137 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 WDR55Q9H6Y2 383 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 MANSC1Q9H8J5 431 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 EXD2Q9NVH0 621 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 MARCOQ9UEW3 520 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 NDRG3Q9UGV2 375 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 MKLN1Q9UL63 735 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 CLEC4AQ9UMR7 237 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 PLEKHA6Q9Y2H5 1048 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 EMC9Q9Y3B6 208 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 ACANP16112 2415 aa8.11□□□□□ -1.11
PDLIM5-209ENST00000506632 SETD2Q9BYW2 2564 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 GOLGA8QA0A0J9YX86 632 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 GOLGA8OA6NCC3 632 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 C9JVG2 144 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 GOLGA8NF8WBI6 632 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 SLCO1B7G3V0H7 640 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 C16orf97H3BN30 126 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 HMGN4O00479 90 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 BCAS1O75363 584 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 ATE1O95260 518 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 SYNGR4O95473 234 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 NUDT14O95848 222 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 CSTAP01040 98 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 RAF1P04049 648 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 PGRP06401 933 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 DNASE1P24855 282 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 LOXP28300 417 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 AGTR1P30556 359 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 SFTPDP35247 375 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 PGM1P36871 562 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 CDKN2CP42773 168 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 KHKP50053 298 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 CASP9P55211 416 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 CTBP2P56545 445 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 CARD18P57730 90 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 TXNL4AP83876 142 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 SELENBP1Q13228 472 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 CBFBQ13951 182 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 QPRTQ15274 297 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 TMEM176BQ3YBM2 270 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 PDCD4Q53EL6 469 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 OXLD1Q5BKU9 147 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 ATAD3BQ5T9A4 648 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 STAC2Q6ZMT1 411 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 C16orf62Q7Z3J2 963 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF619Q8N2I2 560 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 GLB1L3Q8NCI6 653 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 MGARPQ8TDB4 240 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 ZFP90Q8TF47 636 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 XAGE5Q8WWM1 108 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 ST8SIA1Q92185 356 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 CPNE4Q96A23 557 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms