RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ARPC2O15144 300 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 DNAJC8O75937 253 aaPredicted RBP12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 ATP5HO75947 161 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 ZNF682O95780 498 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 OPN1LWP04000 364 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 FESP07332 822 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 IL11P20809 199 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 ENDOUP21128 410 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 ME2P23368 584 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 ACAA2P42765 397 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 IDH2P48735 452 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 STARP49675 285 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 B3GALT5-AS1P59052 145 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 GABPB1Q06547 395 aaPredicted RBP12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 EPS8Q12929 822 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 FOXF1Q12946 379 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 ELOAQ14241 798 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 PLPPR5Q32ZL2 321 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 GFRALQ6UXV0 394 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 CYP2R1Q6VVX0 501 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 TNIP2Q8NFZ5 429 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 ZNF563Q8TA94 476 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 OIT3Q8WWZ8 545 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 CCDC124Q96CT7 223 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 SLX1AQ9BQ83 275 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 V9GYQ6 96 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 SVILO95425 2214 aa12.02□□□□□ -0.49
PDLIM7-212ENST00000504380 CFAP73A6NFT4 308 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 TPST2O60704 377 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 LGI1O95970 557 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 IGHG3P01860 377 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 LINGO3P0C6S8 592 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 ATP6V1B2P21281 511 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 OR1E2P47887 323 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 ZNF41P51814 821 aaPredicted RBP12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 ZNF136P52737 540 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 SUMO3P55854 103 aaPredicted RBP12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 SESN3P58005 492 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 CBFBQ13951 182 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 NPTX1Q15818 432 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 C3AR1Q16581 482 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 DCST1Q5T197 706 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 RAET1LQ5VY80 246 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 PGM2L1Q6PCE3 622 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 POMZP3Q6PJE2 187 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 VTCN1Q7Z7D3 282 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 GRAMD2AQ8IUY3 354 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 CHERPQ8IWX8 916 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 CADM2Q8N3J6 435 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 FAM86B1Q8N7N1 296 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 ATP6V1C2Q8NEY4 427 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 NEIL3Q8TAT5 605 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 RNF145Q96MT1 663 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 SFXN2Q96NB2 322 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 ARHGDIGQ99819 225 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 ARMC7Q9H6L4 198 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 ACKR4Q9NPB9 350 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 EXOSC3Q9NQT5 275 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 CTPS2Q9NRF8 586 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 QPCTLQ9NXS2 382 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 SLC13A4Q9UKG4 626 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 SH3GLB1Q9Y371 365 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 SNX13Q9Y5W8 968 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 BSNQ9UPA5 3926 aa12.01□□□□□ -0.49
PDLIM7-212ENST00000504380 OR2M5A3KFT3 312 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 FAM47E-STBD1D6RA91 191 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 NPIPA2E9PIF3 369 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 NPIPA3F8WFD2 350 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 EFNA2O43921 213 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 GMNNO75496 209 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 IFNA14P01570 189 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 PRKCAP17252 672 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 BMP7P18075 431 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 PGCP20142 388 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 CCNA2P20248 432 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 HTR2AP28223 471 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 SLC6A8P48029 635 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 ERFP50548 548 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 RASSF2P50749 326 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 RGS8P57771 180 aaPredicted RBP12□□□□□ -0.49
PDLIM7-212ENST00000504380 SELENOWP63302 87 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 FOXD4Q12950 439 aaPredicted RBP12□□□□□ -0.49
PDLIM7-212ENST00000504380 MRPL49Q13405 166 aaKnown RBP12□□□□□ -0.49
PDLIM7-212ENST00000504380 GANABQ14697 944 aaKnown RBP12□□□□□ -0.49
PDLIM7-212ENST00000504380 FXNQ16595 210 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 NRF1Q16656 503 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 TMEM44Q2T9K0 475 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 ENPP6Q6UWR7 440 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 CBLL1Q75N03 491 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 ZNF550Q7Z398 422 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 CARM1Q86X55 608 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 ZNF440Q8IYI8 595 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 ULK2Q8IYT8 1036 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 ARHGAP24Q8N264 748 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 GHDCQ8N2G8 530 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 OR6T1Q8NGN1 323 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 OR5M9Q8NGP3 310 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 SMPDL3BQ92485 455 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 PROX1Q92786 737 aa12□□□□□ -0.49
PDLIM7-212ENST00000504380 MCUR1Q96AQ8 359 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms