RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 BANPQ8N9N5 519 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 LRRN4CLQ8ND94 238 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 OR2T11Q8NH01 316 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 OR5W2Q8NH69 310 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 RAB3IL1Q8TBN0 382 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 MIPOL1Q8TD10 442 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 GPR119Q8TDV5 335 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ADAMTS15Q8TE58 950 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ABHD3Q8WU67 409 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 TMEM234Q8WY98 164 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 OR5P2Q8WZ92 322 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 CIDECQ96AQ7 238 aaPredicted RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 MUCL1Q96DR8 90 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 PPP3R2Q96LZ3 170 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 PRPF18Q99633 342 aaKnown RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 NPAS1Q99742 590 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 AMBRA1Q9C0C7 1298 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 BHLHE41Q9C0J9 482 aaPredicted RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 TUBB1Q9H4B7 451 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ALG2Q9H553 416 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 PIF1Q9H611 641 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 GPATCH2Q9NW75 528 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ASIC5Q9NY37 505 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 SH3BP4Q9P0V3 963 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 LIPT1Q9Y234 373 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 MAGED1Q9Y5V3 778 aaPredicted RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 COL6A5A8TX70 2615 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 FBN1P35555 2871 aaKnown RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 CADP27708 2225 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CUBNO60494 3623 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 A0A1W2PPM1 405 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 DPRXA6NFQ7 191 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 OR5H1A6NKK0 313 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 A8MV72 311 aaPredicted RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 SHISA9B4DS77 424 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 RNF223E7ERA6 249 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 GPR171O14626 319 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 ANKRD28O15084 1053 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 SMAD9O15198 467 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 PMS2P2O95744 297 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 AGR2O95994 175 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 ADAP00813 363 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CD8AP01732 235 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CSF3P09919 207 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 FAM157CP0CG43 387 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 BMP4P12644 408 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 BCKDHAP12694 445 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 GGT1P19440 569 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 PRPS1L1P21108 318 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 ENPP1P22413 925 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 SHC1P29353 583 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 TTKP33981 857 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 HPCAL1P37235 193 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 APOBEC1P41238 236 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 RFX3P48380 749 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CCT3P49368 545 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 PRKAG1P54619 331 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 RPL38P63173 70 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CSNK2A1P68400 391 aaPredicted RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 TXNL4AP83876 142 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 H3F3AP84243 136 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 VLDLRP98155 873 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 FOXF1Q12946 379 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 MAD2L1Q13257 205 aaPredicted RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 SKP2Q13309 424 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CBFBQ13951 182 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 VEZF1Q14119 521 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 PPA1Q15181 289 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 TMEM176BQ3YBM2 270 aaPredicted RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CHRFAM7AQ494W8 412 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 DCST2Q5T1A1 773 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 FAM219BQ5XKK7 198 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 FBXW9Q5XUX1 488 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 ABLIM2Q6H8Q1 611 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 OR7E24Q6IFN5 339 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 C11orf71Q6IPW1 123 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 TMEM108Q6UXF1 575 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 TMPPEQ6ZT21 453 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 BHLHA15Q7RTS1 189 aaPredicted RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 NUFIP2Q7Z417 695 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 GALNT5Q7Z7M9 940 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 ZAR1Q86SH2 424 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 MTDHQ86UE4 582 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 RIMKLAQ8IXN7 391 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 C17orf78Q8N4C9 275 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 FAM71CQ8NEG0 241 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 C1orf162Q8NEQ5 155 aaPredicted RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CDC26Q8NHZ8 85 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 FBXO27Q8NI29 283 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 PHOSPHO1Q8TCT1 267 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 TMEM158Q8WZ71 300 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF75CPQ92670 426 aaPredicted RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 PROX1Q92786 737 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 PMM1Q92871 262 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 C16orf58Q96GQ5 468 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 ADAD1Q96M93 576 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 MUS81Q96NY9 551 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 SDF2Q99470 211 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 DHRS9Q9BPW9 319 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 SRXN1Q9BYN0 137 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms