RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 EFNA2O43921 213 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 CYP7B1O75881 506 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 SYNGR4O95473 234 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 H6PDO95479 791 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 NTN1O95631 604 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 CSTAP01040 98 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 UBTFL6P0CB48 400 aaPredicted RBP16.49■□□□□ 0.23
HOXD11-202ENST00000498438 FGFBP1Q14512 234 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 QPRTQ15274 297 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 TIGD2Q4W5G0 525 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 GPAT3Q53EU6 434 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 PDSS1Q5T2R2 415 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 EIF3MQ7L2H7 374 aaKnown RBP16.49■□□□□ 0.23
HOXD11-202ENST00000498438 HMGN2P46Q86SG4 172 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 ZNF619Q8N2I2 560 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 DYDC1Q8WWB3 177 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 MRGPRX4Q96LA9 322 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 POLDIP3Q9BY77 421 aaKnown RBP16.49■□□□□ 0.23
HOXD11-202ENST00000498438 SAP130Q9H0E3 1048 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 VIPAS39Q9H9C1 493 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 SLC6A13Q9NSD5 602 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 ITGB1BP2Q9UKP3 347 aa16.49■□□□□ 0.23
HOXD11-202ENST00000498438 FAM221AA4D161 298 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 HMGB1P1B2RPK0 211 aaPredicted RBP16.48■□□□□ 0.23
HOXD11-202ENST00000498438 CGAP01215 116 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 EPXP11678 715 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 TXNL4AP83876 142 aaKnown RBP16.48■□□□□ 0.23
HOXD11-202ENST00000498438 SLC25A53Q5H9E4 307 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 COX20Q5RI15 118 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 ZNF474Q6S9Z5 364 aaPredicted RBP16.48■□□□□ 0.23
HOXD11-202ENST00000498438 FAM214BQ7L5A3 538 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 MIER2Q8N344 545 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 ANKFN1Q8N957 763 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 FAM71CQ8NEG0 241 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 OIT3Q8WWZ8 545 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 NRGNQ92686 78 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 OSTF1Q92882 214 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 THUMPD3Q9BV44 507 aaKnown RBP16.48■□□□□ 0.23
HOXD11-202ENST00000498438 QRSL1Q9H0R6 528 aaKnown RBP16.48■□□□□ 0.23
HOXD11-202ENST00000498438 CLEC4MQ9H2X3 399 aaPredicted RBP16.48■□□□□ 0.23
HOXD11-202ENST00000498438 TCF7L2Q9NQB0 619 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 RASSF1Q9NS23 344 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 CLEC4AQ9UMR7 237 aa16.48■□□□□ 0.23
HOXD11-202ENST00000498438 ETV2O00321 342 aaPredicted RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 POLR3GO15318 223 aaPredicted RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 DNAJA2O60884 412 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 BCAS1O75363 584 aaPredicted RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 TGDSO95455 350 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 KRT75O95678 551 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 PLGP00747 810 aaPredicted RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 CHRM4P08173 479 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 CD8BP10966 210 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 PGM1P36871 562 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 ANXA11P50995 505 aaKnown RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 POLR2JP52435 117 aaKnown RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 CHRNEQ04844 493 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 SELENBP1Q13228 472 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 DAZAP2Q15038 168 aaPredicted RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 SYPL1Q16563 259 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 TMEM176BQ3YBM2 270 aaPredicted RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 AP1ARQ63HQ0 302 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 MSANTD1Q6ZTZ1 278 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 ATP6V1C2Q8NEY4 427 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 ZFP90Q8TF47 636 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 VPS33AQ96AX1 596 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 ZG16BQ96DA0 208 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 GMPPAQ96IJ6 420 aaPredicted RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 TRNT1Q96Q11 434 aaKnown RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 EBF4Q9BQW3 602 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 SRXN1Q9BYN0 137 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 RMND5AQ9H871 391 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 COQ10BQ9H8M1 238 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 INTS9Q9NV88 658 aaKnown RBP16.47■□□□□ 0.23
HOXD11-202ENST00000498438 PROCRQ9UNN8 238 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 LIPT1Q9Y234 373 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 SLC35A3Q9Y2D2 325 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 EMC9Q9Y3B6 208 aa16.47■□□□□ 0.23
HOXD11-202ENST00000498438 SH3D21A4FU49 640 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 GJE1A6NN92 205 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 SS18L1O75177 396 aaPredicted RBP16.46■□□□□ 0.23
HOXD11-202ENST00000498438 ANP32DO95626 131 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 PGCP20142 388 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 CD79BP40259 229 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 IDH3AP50213 366 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 CTBP2P56545 445 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 CARD18P57730 90 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 PPP2R2AP63151 447 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 FAM27E3Q08E93 113 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 ZNF239Q16600 458 aaKnown RBP16.46■□□□□ 0.23
HOXD11-202ENST00000498438 GTDC1Q4AE62 458 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 ST8SIA1Q92185 356 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 ITCHQ96J02 903 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 DACH2Q96NX9 599 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 SLC38A1Q9H2H9 487 aa16.46■□□□□ 0.23
HOXD11-202ENST00000498438 CELSR1Q9NYQ6 3014 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 UQCRHLA0A096LP55 91 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 FAM234BA2RU67 622 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 CLDN24A6NM45 220 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 ZCCHC18P0CG32 403 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 NID1P14543 1247 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms