RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRKCB-209ENST00000498058 HBMQ6B0K9 141 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 ESPNLQ6ZVH7 1005 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 MAVSQ7Z434 540 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 SPATA21Q7Z572 469 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 SPATA19Q7Z5L4 167 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 WFDC8Q8IUA0 241 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 COX18Q8N8Q8 333 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 B4GALNT2Q8NHY0 566 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 THOC1Q96FV9 657 aaKnown RBP16.53■□□□□ 0.24
PRKCB-209ENST00000498058 PLPPR2Q96GM1 343 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 TMEM204Q9BSN7 226 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 WDR55Q9H6Y2 383 aaPredicted RBP16.53■□□□□ 0.24
PRKCB-209ENST00000498058 GIN1Q9NXP7 522 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 MCTS1Q9ULC4 181 aaKnown RBP16.53■□□□□ 0.24
PRKCB-209ENST00000498058 TRIM33Q9UPN9 1127 aa16.53■□□□□ 0.24
PRKCB-209ENST00000498058 ANK3Q12955 4377 aaKnown RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 GOLGA8QA0A0J9YX86 632 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 GOLGA8OA6NCC3 632 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 GOLGA8NF8WBI6 632 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 SYNGR4O95473 234 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 SFTPDP35247 375 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 ZNF41P51814 821 aaPredicted RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 IRX1P78414 480 aaPredicted RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 POU6F2P78424 691 aaPredicted RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 EMX2Q04743 252 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 CAPRIN1Q14444 709 aaKnown RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 LASP1Q14847 261 aaKnown RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 MLC1Q15049 377 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 TOMM34Q15785 309 aaPredicted RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 SLC9B1Q4ZJI4 515 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 OGFOD2Q6N063 350 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 ZCCHC12Q6PEW1 402 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 PLEKHM3Q6ZWE6 761 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 NUFIP2Q7Z417 695 aaKnown RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 LILRA2Q8N149 483 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 LILRB1Q8NHL6 650 aaPredicted RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 RFWD2Q8NHY2 731 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 ABHD3Q8WU67 409 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 JADE3Q92613 823 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 KLHL15Q96M94 604 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 ELAC2Q9BQ52 826 aaKnown RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 BDH2Q9BUT1 245 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 BTBD2Q9BX70 525 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 TMEM120AQ9BXJ8 343 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 ACTR6Q9GZN1 396 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 CXorf36Q9H7Y0 433 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 ZCCHC3Q9NUD5 404 aaKnown RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 MRGBPQ9NV56 204 aa16.52■□□□□ 0.24
PRKCB-209ENST00000498058 PAQR5Q9NXK6 330 aaPredicted RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 NOP53Q9NZM5 478 aaKnown RBP16.52■□□□□ 0.24
PRKCB-209ENST00000498058 KIAA1324LA8MWY0 1029 aaPredicted RBP16.51■□□□□ 0.23
PRKCB-209ENST00000498058 SCDO00767 359 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 SCAMP2O15127 329 aaKnown RBP16.51■□□□□ 0.23
PRKCB-209ENST00000498058 GCM2O75603 506 aaPredicted RBP16.51■□□□□ 0.23
PRKCB-209ENST00000498058 FAM107AO95990 144 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 PPP3CBP16298 524 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 PCSK6P29122 969 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 LCN1P31025 176 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 ZNF239Q16600 458 aaKnown RBP16.51■□□□□ 0.23
PRKCB-209ENST00000498058 KLHL26Q53HC5 615 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 CGB2Q6NT52 195 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 BEND4Q6ZU67 534 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 ATG4DQ86TL0 474 aaPredicted RBP16.51■□□□□ 0.23
PRKCB-209ENST00000498058 RNF128Q8TEB7 428 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 MTERF3Q96E29 417 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 PIGUQ9H490 435 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 COQ10BQ9H8M1 238 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 GLRX2Q9NS18 164 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 GPATCH2Q9NW75 528 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 ASIC5Q9NY37 505 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 STOML1Q9UBI4 398 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 ICAM5Q9UMF0 924 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 CARD8Q9Y2G2 431 aa16.51■□□□□ 0.23
PRKCB-209ENST00000498058 UBDO15205 165 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 CNOT4O95628 575 aaKnown RBP16.5■□□□□ 0.23
PRKCB-209ENST00000498058 HPGDP15428 266 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 PAX1P15863 534 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 PSMB1P20618 241 aaKnown RBP16.5■□□□□ 0.23
PRKCB-209ENST00000498058 ASMTP46597 345 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 CARD18P57730 90 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 PTGR1Q14914 329 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 LSM12Q3MHD2 195 aaKnown RBP16.5■□□□□ 0.23
PRKCB-209ENST00000498058 METTL21CQ5VZV1 264 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 CDC73Q6P1J9 531 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 TFAP2EQ6VUC0 442 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 MISPQ8IVT2 679 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 TUSC5Q8IXB3 177 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 GABRG1Q8N1C3 465 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 FBXO27Q8NI29 283 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 PHOSPHO1Q8TCT1 267 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 S100PBPQ96BU1 408 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 CCT8L2Q96SF2 557 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 STACQ99469 402 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 C1orf50Q9BV19 199 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 DUSP22Q9NRW4 184 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 ZNF701Q9NV72 531 aaPredicted RBP16.5■□□□□ 0.23
PRKCB-209ENST00000498058 GPR52Q9Y2T5 361 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 CADP27708 2225 aa16.5■□□□□ 0.23
PRKCB-209ENST00000498058 FAM171A2A8MVW0 826 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms