RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ICAM5Q9UMF0 924 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 RPH3AQ9Y2J0 694 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-227ENST00000498056 SPTA1P02549 2419 aa12.33□□□□□ -0.43
CPNE1-227ENST00000498056 SHANK1Q9Y566 2161 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 DHRS12A0PJE2 317 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 CPSF4LA6NMK7 179 aaKnown RBP12.33□□□□□ -0.44
CPNE1-227ENST00000498056 TMEM229AB2RXF0 380 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 SHISA8B8ZZ34 492 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 hCG_2039718K7EN88 272 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 ATXN7O15265 892 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-227ENST00000498056 CBR3O75828 277 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 TRAPPC6AO75865 159 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 GLSO94925 669 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-227ENST00000498056 LGI1O95970 557 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 MT-ND1P03886 318 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 IFNW1P05000 195 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 C8BP07358 591 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 CELA3AP09093 270 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 LINGO3P0C6S8 592 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 HK1P19367 917 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 PSMA4P25789 261 aaKnown RBP12.33□□□□□ -0.44
CPNE1-227ENST00000498056 DPP4P27487 766 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 COPZ1P61923 177 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 ALDH6A1Q02252 535 aaKnown RBP12.33□□□□□ -0.44
CPNE1-227ENST00000498056 TOMM34Q15785 309 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-227ENST00000498056 PLPPR5Q32ZL2 321 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 PRR30Q53SZ7 412 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-227ENST00000498056 RPUSD3Q6P087 351 aaKnown RBP12.33□□□□□ -0.44
CPNE1-227ENST00000498056 POMZP3Q6PJE2 187 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 ARSKQ6UWY0 536 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 ZGRF1Q86YA3 2104 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 RBM45Q8IUH3 476 aaKnown RBP12.33□□□□□ -0.44
CPNE1-227ENST00000498056 OR52E4Q8NGH9 312 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 OR4D11Q8NGI4 311 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 OR6T1Q8NGN1 323 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 NTNG2Q96CW9 530 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 WBP1Q96G27 269 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 TAAR6Q96RI8 345 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 WFDC6Q9BQY6 131 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 EXO5Q9H790 373 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 MED17Q9NVC6 651 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 RPS6KB2Q9UBS0 482 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 AURKCQ9UQB9 309 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 NTNG1Q9Y2I2 539 aa12.33□□□□□ -0.44
CPNE1-227ENST00000498056 SPENQ96T58 3664 aaKnown RBP12.33□□□□□ -0.44
CPNE1-227ENST00000498056 GTF3C1Q12789 2109 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 AQP12BA6NM10 295 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 CRYABP02511 175 aaKnown RBP12.32□□□□□ -0.44
CPNE1-227ENST00000498056 HTR2AP28223 471 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 SRD5A2P31213 254 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 IDH2P48735 452 aaKnown RBP12.32□□□□□ -0.44
CPNE1-227ENST00000498056 ZNF136P52737 540 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 DSCR4P56555 118 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-227ENST00000498056 TAS2R41P59536 307 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 KCNC4Q03721 635 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 CCNIQ14094 377 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 KPNB1Q14974 876 aaKnown RBP12.32□□□□□ -0.44
CPNE1-227ENST00000498056 NPTX1Q15818 432 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 FAM98BQ52LJ0 330 aaKnown RBP12.32□□□□□ -0.44
CPNE1-227ENST00000498056 RNFT1Q5M7Z0 435 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 WIPI1Q5MNZ9 446 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-227ENST00000498056 YRDCQ86U90 279 aaKnown RBP12.32□□□□□ -0.44
CPNE1-227ENST00000498056 LSRQ86X29 649 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-227ENST00000498056 AQP12AQ8IXF9 295 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 FAM83FQ8NEG4 500 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-227ENST00000498056 RNF217Q8TC41 542 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 SLC35B4Q969S0 331 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 PYURFQ96I23 114 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 MCHR1Q99705 422 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 UGT2B28Q9BY64 529 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 SLC6A15Q9H2J7 730 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 UBQLN3Q9H347 655 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 EVA1AQ9H8M9 152 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 LIPGQ9Y5X9 500 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 COL6A6A6NMZ7 2263 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 ARHGAP21Q5T5U3 1957 aa12.32□□□□□ -0.44
CPNE1-227ENST00000498056 KMT2BQ9UMN6 2715 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-227ENST00000498056 NPIPA5E9PKD4 350 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 SEMG1P04279 462 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 FABP3P05413 133 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 GPIP06744 558 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 GP1BBP13224 206 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 PRKCAP17252 672 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 ACAA2P42765 397 aaKnown RBP12.31□□□□□ -0.44
CPNE1-227ENST00000498056 YAP1P46937 504 aaKnown RBP12.31□□□□□ -0.44
CPNE1-227ENST00000498056 VLDLRP98155 873 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 CHRNB3Q05901 458 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 FOXD4Q12950 439 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-227ENST00000498056 ENTPD8Q5MY95 495 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 ADGRG5Q8IZF4 528 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 CISD2Q8N5K1 135 aaKnown RBP12.31□□□□□ -0.44
CPNE1-227ENST00000498056 OR5M1Q8NGP8 315 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 GPR119Q8TDV5 335 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 TMEM234Q8WY98 164 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 ZBTB8AQ96BR9 441 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 SFXN2Q96NB2 322 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 ZNF559Q9BR84 538 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 OR2B2Q9GZK3 357 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 DEFB127Q9H1M4 99 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms