RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 STAT5AP42229 794 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 GIPRP48546 466 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 SMSP52788 366 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 PNLIPRP2P54317 469 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 CDK5Q00535 292 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 ZNF117Q03924 483 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 TCF15Q12870 199 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 RAB39AQ14964 217 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 CSRP2Q16527 193 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 ACSM5Q6NUN0 579 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 SLC27A4Q6P1M0 643 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 RNF113BQ8IZP6 322 aaKnown RBP16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 TCEANCQ8N8B7 351 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 NUBPLQ8TB37 319 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 TP53INP1Q96A56 240 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 BPIFA2Q96DR5 249 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 KLHDC3Q9BQ90 382 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 NDUFA13Q9P0J0 144 aa16.31■□□□□ 0.2
CHRNA4-206ENST00000498043 MT-ND2P03891 347 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 EVI2BP34910 448 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 TEKQ02763 1124 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 PRKCDQ05655 676 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 PCOLCEQ15113 449 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 SLC30A6Q6NXT4 461 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 FANK1Q8TC84 345 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 LIN37Q96GY3 246 aaPredicted RBP16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 MPP4Q96JB8 637 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 ZNF426Q9BUY5 554 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 SLC25A19Q9HC21 320 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 EXOSC3Q9NQT5 275 aaKnown RBP16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 CLN6Q9NWW5 311 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 GPR83Q9NYM4 423 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 DNAJC27Q9NZQ0 273 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 NPFFR2Q9Y5X5 522 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 UNC119BA6NIH7 251 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 TMEM200CA6NKL6 621 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 H3BSA7 217 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 HCRTR2O43614 444 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 RGS10O43665 173 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 NDUFB5O43674 189 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 PRKYO43930 277 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 SAGP10523 405 aaPredicted RBP16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 PRSS33Q8NF86 280 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 OR13C2Q8NGS9 318 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 OR2Y1Q8NGV0 311 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 C3orf49Q96BT1 292 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 HS6ST2Q96MM7 605 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 TAAR9Q96RI9 348 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 COPS4Q9BT78 406 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 TSSK6Q9BXA6 273 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 CCNB1IP1Q9NPC3 277 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 FAM86C1Q9NVL1 165 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 PSORS1C1Q9UIG5 152 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 CDH10Q9Y6N8 788 aa16.3■□□□□ 0.2
CHRNA4-206ENST00000498043 LOC102723996A0A087X1L8 192 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 A0A1W2PNU3 283 aaPredicted RBP16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 OR6C70A6NIJ9 312 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 ALG1L2C9J202 215 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 TMX2-CTNND1H3BSU7 103 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 ENTPD6O75354 484 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 PPM1BO75688 479 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 FADS2O95864 444 aaKnown RBP16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 MT-CO3P00414 261 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 FOLR3P41439 243 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 RBM34P42696 430 aaKnown RBP16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 PCYT1AP49585 367 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 MLLT10P55197 1068 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 FBXW4P57775 412 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 CSNK2BP67870 215 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 BTBD16Q32M84 506 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 CCDC81Q6ZN84 652 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 BCDIN3DQ7Z5W3 292 aaKnown RBP16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 OR8J1Q8NGP2 316 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 WDR36Q8NI36 951 aaKnown RBP16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 IPCEF1Q8WWN9 437 aaPredicted RBP16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 OSTF1Q92882 214 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 YIPF3Q9GZM5 350 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 PLCXD1Q9NUJ7 323 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 TMEM5Q9Y2B1 443 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 HS3ST3B1Q9Y662 390 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 CEPT1Q9Y6K0 416 aa16.29■□□□□ 0.2
CHRNA4-206ENST00000498043 IGHV1-45A0A0A0MS14 117 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 A0A1W2PQD3 144 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 CLCA1A8K7I4 914 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 PLD2O14939 933 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 PCMT1P22061 227 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 MST1P26927 711 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 MAP2K4P45985 399 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 CTBP2P56545 445 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 SNRPGP62308 76 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 PSPHP78330 225 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 CRYZQ08257 329 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 CNPY1Q3B7I2 92 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 ZBED5Q49AG3 693 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 HES3Q5TGS1 186 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 CDK20Q8IZL9 346 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 OR4Q3Q8NH05 313 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 DNAJA4Q8WW22 397 aaPredicted RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 SAMD8Q96LT4 415 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 DDA1Q9BW61 102 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms