RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 AKAP6Q13023 2319 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 C7orf72A4D263 438 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 TUBAL3A6NHL2 446 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 H0YC42 278 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 NUDT14O95848 222 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 AGR2O95994 175 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 OR12D1P0DN82 309 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 HOXB9P17482 250 aaPredicted RBP13.8□□□□□ -0.2
NUP50-219ENST00000497960 PPIBP23284 216 aaKnown RBP13.8□□□□□ -0.2
NUP50-219ENST00000497960 ME2P23368 584 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 PRDX6P30041 224 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 EIF1P41567 113 aaKnown RBP13.8□□□□□ -0.2
NUP50-219ENST00000497960 CRATP43155 626 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 TPD52P55327 224 aaPredicted RBP13.8□□□□□ -0.2
NUP50-219ENST00000497960 CLDN15P56746 228 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 TXNL4AP83876 142 aaKnown RBP13.8□□□□□ -0.2
NUP50-219ENST00000497960 PON3Q15166 354 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 PLPPR5Q32ZL2 321 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.8□□□□□ -0.2
NUP50-219ENST00000497960 ATAD3BQ5T9A4 648 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 C16orf62Q7Z3J2 963 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 LUZP2Q86TE4 346 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 METTL25Q8N6Q8 603 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 CNEP1R1Q8N9A8 125 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 CHDHQ8NE62 594 aaPredicted RBP13.8□□□□□ -0.2
NUP50-219ENST00000497960 MIPOL1Q8TD10 442 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 FIG4Q92562 907 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 SDF2Q99470 211 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 CGREF1Q99674 301 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 RBM24Q9BX46 236 aaKnown RBP13.8□□□□□ -0.2
NUP50-219ENST00000497960 SLC25A37Q9NYZ2 338 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 VAPAQ9P0L0 249 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 CORO2BQ9UQ03 480 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 DTNAQ9Y4J8 743 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 FBN2P35556 2912 aa13.8□□□□□ -0.2
NUP50-219ENST00000497960 ABCA4P78363 2273 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 A0A1W2PNV4 684 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 CLIC1O00299 241 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 EIF1AYO14602 144 aaKnown RBP13.79□□□□□ -0.2
NUP50-219ENST00000497960 STX11O75558 287 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 C1QCP02747 245 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 FCGR2AP12318 317 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 EIF1AXP47813 144 aaKnown RBP13.79□□□□□ -0.2
NUP50-219ENST00000497960 P2RX1P51575 399 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 SUMO3P55854 103 aaPredicted RBP13.79□□□□□ -0.2
NUP50-219ENST00000497960 RAC1P63000 192 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 HPCAP84074 193 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 SORDQ00796 357 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 ZNF117Q03924 483 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 CAPRIN1Q14444 709 aaKnown RBP13.79□□□□□ -0.2
NUP50-219ENST00000497960 COX20Q5RI15 118 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 PPP4R4Q6NUP7 873 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 CDH24Q86UP0 819 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 MSRB3Q8IXL7 192 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 FNDC9Q8TBE3 224 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 RAB8BQ92930 207 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 RNF145Q96MT1 663 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 CPPED1Q9BRF8 314 aaPredicted RBP13.79□□□□□ -0.2
NUP50-219ENST00000497960 PRRG4Q9BZD6 226 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 GID8Q9NWU2 228 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 PAQR5Q9NXK6 330 aaPredicted RBP13.79□□□□□ -0.2
NUP50-219ENST00000497960 CARD8Q9Y2G2 431 aa13.79□□□□□ -0.2
NUP50-219ENST00000497960 TRBV5-3A0A0A0MS03 114 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 EVPLLA8MZ36 301 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 NPIPB9F8W1W9 429 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 AIM2O14862 343 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 TNFSF13O75888 250 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 SMNDC1O75940 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
NUP50-219ENST00000497960 ETFAP13804 333 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 NUDT2P50583 147 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 RNF144AP50876 292 aaPredicted RBP13.78□□□□□ -0.2
NUP50-219ENST00000497960 DSTNP60981 165 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 FADDQ13158 208 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 FGFBP1Q14512 234 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 GPR68Q15743 365 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 ARHGAP11BQ3KRB8 267 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 PDSS1Q5T2R2 415 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 FAM91A1Q658Y4 838 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 DLEU7Q6UYE1 221 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 GGNQ86UU5 652 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 XAGE5Q8WWM1 108 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 ZNF845Q96IR2 970 aaPredicted RBP13.78□□□□□ -0.2
NUP50-219ENST00000497960 SLC39A3Q9BRY0 314 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 DNAJB12Q9NXW2 375 aaKnown RBP13.78□□□□□ -0.2
NUP50-219ENST00000497960 GALNT8Q9NY28 637 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 P2RX2Q9UBL9 471 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 TAGLN3Q9UI15 199 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 ITGB1BP2Q9UKP3 347 aa13.78□□□□□ -0.2
NUP50-219ENST00000497960 MCTS1Q9ULC4 181 aaKnown RBP13.78□□□□□ -0.2
NUP50-219ENST00000497960 DCHS2Q6V1P9 2916 aa13.77□□□□□ -0.2
NUP50-219ENST00000497960 SERINC4A6NH21 518 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 A8MXE2 369 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 HMGN4O00479 90 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 MSTNO14793 375 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 ZNF264O43296 627 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 EIF4E2O60573 245 aaKnown RBP13.77□□□□□ -0.21
NUP50-219ENST00000497960 CTAG2O75638 210 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 SYNGR4O95473 234 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 OPN1LWP04000 364 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms