RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 MED11Q9P086 117 aa17.94■□□□□ 0.46
SCAMP3-209ENST00000497470 CFAP47Q6ZTR5 3102 aa17.94■□□□□ 0.46
SCAMP3-209ENST00000497470 BCAS1O75363 584 aaPredicted RBP17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 OR5F1O95221 314 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 IGHG3P01860 377 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 DPP4P27487 766 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 ELK4P28324 431 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 APOBEC1P41238 236 aaKnown RBP17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 ZNF41P51814 821 aaPredicted RBP17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 SMIM11AP58511 58 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 GPR85P60893 370 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 CCNIQ14094 377 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 AAGABQ6PD74 315 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 ULK3Q6PHR2 472 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 PCSK4Q6UW60 755 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 GRINAQ7Z429 371 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 CYP4Z1Q86W10 505 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 GTPBP8Q8N3Z3 284 aaPredicted RBP17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 CANT1Q8WVQ1 401 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 MPP4Q96JB8 637 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 PRRC1Q96M27 445 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 ZNF300Q96RE9 604 aaPredicted RBP17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 MCHR1Q99705 422 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 BARD1Q99728 777 aaKnown RBP17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 AMBRA1Q9C0C7 1298 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 MED17Q9NVC6 651 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 NDUFAF4Q9P032 175 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 FAM32AQ9Y421 112 aaKnown RBP17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 LOC400499M0QZD8 3231 aa17.93■□□□□ 0.46
SCAMP3-209ENST00000497470 MGAQ8IWI9 3026 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 EML6Q6ZMW3 1958 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 A0A0G2JMM0 328 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 A0A1W2PPB8 328 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 A0A1W2PRS3 328 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 PINLYPA6NC86 204 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 KIR3DP1A8MWS1 328 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 B4DXG7 233 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 GNB5O14775 395 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 ATXN7O15265 892 aaPredicted RBP17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 OIP5O43482 229 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 ZIC3O60481 467 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 TPST2O60704 377 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 HCN1O60741 890 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 ADAM11O75078 769 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 FKBP6O75344 327 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 FABP3P05413 133 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 PNMTP11086 282 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 PRKCAP17252 672 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 CHMP24386 653 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 CLK1P49759 484 aaKnown RBP17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 PLGLB1Q02325 96 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 SLC10A1Q14973 349 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 NPTX1Q15818 432 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 PLPPR5Q32ZL2 321 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 NHSL2Q5HYW2 709 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 C5orf46Q6UWT4 87 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 HMGN2P46Q86SG4 172 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 TMEM251Q8N6I4 163 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 FAM86B1Q8N7N1 296 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 OR4D11Q8NGI4 311 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 RSRC1Q96IZ7 334 aaKnown RBP17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 DHRS1Q96LJ7 313 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 ZNF71Q9NQZ8 489 aaPredicted RBP17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 PLSCR2Q9NRY7 297 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 STOML1Q9UBI4 398 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 FBXL2Q9UKC9 423 aa17.92■□□□□ 0.46
SCAMP3-209ENST00000497470 USP24Q9UPU5 2620 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 A0A0B4J2E0 115 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 A0A1B0GVC2 190 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 A0A1B0GX12 115 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 TRAPPC13A5PLN9 417 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 M0R3H8 397 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 HNRNPRO43390 633 aaKnown RBP17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 SUSD5O60279 629 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 KRT36O76013 467 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 IGF2P01344 180 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 GKN3PP0CG01 181 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 FCGR1AP12314 374 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 GP1BBP13224 206 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 ST13P50502 369 aaKnown RBP17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 HMGA2P52926 109 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 SESN3P58005 492 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 PPIAP62937 165 aaKnown RBP17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 ST3GAL3Q11203 375 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 KPNB1Q14974 876 aaKnown RBP17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 QPRTQ15274 297 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 OR1Q1Q15612 314 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 INPP5JQ15735 1006 aaPredicted RBP17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 KRTCAP3Q53RY4 240 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 ZNF324BQ6AW86 544 aaPredicted RBP17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 ZDHHC21Q8IVQ6 265 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 OFCC1Q8IZS5 231 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 TMCO5AQ8N6Q1 288 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 Q8NA96 180 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 SLC38A4Q969I6 547 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 SH3YL1Q96HL8 342 aaPredicted RBP17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 PIGQQ9BRB3 760 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 HEATR5AQ86XA9 2040 aa17.91■□□□□ 0.46
SCAMP3-209ENST00000497470 A0A1W2PRQ8 180 aa17.9■□□□□ 0.46
SCAMP3-209ENST00000497470 C2orf72A6NCS6 295 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms