RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SLC9B1P1A6NJY1 282 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 RFPL4AA6NLU0 287 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 RFPL4AL1F8VTS6 287 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 ARPC1BO15143 372 aaKnown RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 UGDHO60701 494 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 SPDEFO95238 335 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 HOXC4P09017 264 aaPredicted RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 ETFAP13804 333 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 CCR7P32248 378 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 CSNK1EP49674 416 aaKnown RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 CDKN1CP49918 316 aaPredicted RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 TAS2R60P59551 318 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 ZNF345Q14585 488 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 KLHL26Q53HC5 615 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 RPL13AP3Q6NVV1 102 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 SSX9Q7RTT3 188 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 NAA40Q86UY6 237 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 ADGRG2Q8IZP9 1017 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 ZFP41Q8N8Y5 198 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 OR4F15Q8NGB8 312 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 EXOSC8Q96B26 276 aaKnown RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 PCED1BQ96HM7 432 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 ART5Q96L15 291 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 FXYD6Q9H0Q3 95 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 OR10A4Q9H209 315 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 BEX1Q9HBH7 125 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 TMEM138Q9NPI0 162 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 GPATCH2Q9NW75 528 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 PPP4R1LQ9P1A2 415 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 VPS29Q9UBQ0 182 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 GHRLQ9UBU3 117 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 NUP214P35658 2090 aaPredicted RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 VWA8A3KMH1 1905 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 A0A0G2JK05 382 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 C5orf67F2Z3F1 127 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 CXCL14O95715 111 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 OR4Q2P0C623 313 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 EPORP19235 508 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 IDSP22304 550 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 SOX18P35713 384 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 PPM1AP35813 382 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 RAD52P43351 418 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 UBE2IP63279 158 aaKnown RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 ANKRD39Q53RE8 183 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 DNLZQ5SXM8 178 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 PTRHD1Q6GMV3 140 aaKnown RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 ZNF322Q6U7Q0 402 aaPredicted RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 CXXC5Q7LFL8 322 aaKnown RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 CFAP206Q8IYR0 622 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 ZNF683Q8IZ20 524 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 HORMAD2Q8N7B1 307 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 C15orf40Q8WUR7 153 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 OSTF1Q92882 214 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 ZFP3Q96NJ6 502 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 ZNF649Q9BS31 505 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 ACSS1Q9NUB1 689 aaPredicted RBP8.45□□□□□ -1.06
HPS4-217ENST00000496385 MED17Q9NVC6 651 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 KLHL42Q9P2K6 505 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 ATG2AQ2TAZ0 1938 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 DOCK4Q8N1I0 1966 aa8.45□□□□□ -1.06
HPS4-217ENST00000496385 IGLV3-10A0A075B6K4 115 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 TRBV23-1A0A0A0MS06 115 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 A0A1W2PRQ8 180 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 COLCA2A8K830 154 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 GABARAPH6UMI1 98 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 PRAMEF11O60813 436 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 NDUFB6O95139 128 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 POP4O95707 220 aaKnown RBP8.44□□□□□ -1.06
HPS4-217ENST00000496385 IGFBP1P08833 259 aaPredicted RBP8.44□□□□□ -1.06
HPS4-217ENST00000496385 PIRTP0C851 137 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 OR12D1P0DN82 309 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 FOSL2P15408 326 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 LAP3P28838 519 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 ACTR1BP42025 376 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 ART1P52961 327 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 LIM2P55344 173 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 BLOC1S1P78537 153 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 ATP13A5Q4VNC0 1218 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 HENMT1Q5T8I9 393 aaKnown RBP8.44□□□□□ -1.06
HPS4-217ENST00000496385 WSCD1Q658N2 575 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 SFRP4Q6FHJ7 346 aaPredicted RBP8.44□□□□□ -1.06
HPS4-217ENST00000496385 ACSM5Q6NUN0 579 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 H3F3CQ6NXT2 135 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 RSPO2Q6UXX9 243 aaPredicted RBP8.44□□□□□ -1.06
HPS4-217ENST00000496385 RELL2Q8NC24 303 aaPredicted RBP8.44□□□□□ -1.06
HPS4-217ENST00000496385 SLC7A13Q8TCU3 470 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 SPRYD4Q8WW59 207 aaPredicted RBP8.44□□□□□ -1.06
HPS4-217ENST00000496385 NR4A3Q92570 626 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 C19orf43Q9BQ61 176 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 OCSTAMPQ9BR26 566 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 TEX12Q9BXU0 123 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 SMCO4Q9NRQ5 59 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 FKBPLQ9UIM3 349 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 FBXW2Q9UKT8 454 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 FLVCR2Q9UPI3 526 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 TRAV1-2A0A0B4J238 106 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 C9orf170A2RU37 121 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 TERTO14746 1132 aaKnown RBP8.44□□□□□ -1.06
HPS4-217ENST00000496385 SLC31A2O15432 143 aa8.44□□□□□ -1.06
HPS4-217ENST00000496385 NME6O75414 186 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms