RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 COMMD3-BMI1R4GMX3 469 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 ADAMTS9Q9P2N4 1935 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 IGHV3OR16-12A0A075B7B8 117 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 LINC00854A0A1B0GVQ3 168 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 ARHGEF35A5YM69 484 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 METTL21EPA6NDL7 271 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 NPIPA7E9PJI5 369 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 KIF2AO00139 706 aaPredicted RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 CHMP2AO43633 222 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 CDH16O75309 829 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 TM7SF2O76062 418 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 TSPAN12O95859 305 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 NPIPA8P0DM63 369 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 CPN1P15169 458 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 H2AFXP16104 143 aaPredicted RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 PRKACAP17612 351 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 IDSP22304 550 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 OTX1P32242 354 aaPredicted RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 NUP62P37198 522 aaPredicted RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 CDKN1BP46527 198 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 SLC7A2P52569 658 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 CARD18P57730 90 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 RPS6P62753 249 aaKnown RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 NOP14P78316 857 aaKnown RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 ZFP36L1Q07352 338 aaKnown RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 SYCP1Q15431 976 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 UBE2V2Q15819 145 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 ZIC1Q15915 447 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 CAMK4Q16566 473 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 NKAIN1Q4KMZ8 207 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 VWA2Q5GFL6 755 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 LRRC66Q68CR7 880 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 REP15Q6BDI9 236 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 FAAP20Q6NZ36 180 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 BTNL3Q6UXE8 466 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 CYS1Q717R9 158 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 TSEN54Q7Z6J9 526 aaKnown RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 SLC25A42Q86VD7 318 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 ZNF321PQ8N8H1 164 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 BBS1Q8NFJ9 593 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 KCNG3Q8TAE7 436 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 C18orf25Q96B23 403 aaPredicted RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 UPRTQ96BW1 309 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 LRRC39Q96DD0 335 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 C12orf66Q96MD2 445 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 PARD6BQ9BYG5 372 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 HAUS4Q9H6D7 363 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 SMYD3Q9H7B4 428 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 SP140LQ9H930 580 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 MCCC2Q9HCC0 563 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 ZFP14Q9HCL3 533 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 LZTFL1Q9NQ48 299 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 DUS2Q9NX74 493 aaKnown RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 KLRF1Q9NZS2 232 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 ATP10DQ9P241 1426 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 NPIPA1Q9UND3 350 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 MOB4Q9Y3A3 225 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 EXOSC1Q9Y3B2 195 aaKnown RBP2.89□□□□□ -1.95
CLK1-214ENST00000496205 NPTNQ9Y639 398 aa2.89□□□□□ -1.95
CLK1-214ENST00000496205 NPIPA5A0A0B4J1W7 369 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 ZNF840PA6NDX5 716 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 ZNF487B1APH4 448 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 ZNF879B4DU55 563 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 C9JVG2 144 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 NPIPA5E9PKD4 350 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 TRDMT1O14717 391 aaKnown RBP2.88□□□□□ -1.95
CLK1-214ENST00000496205 TYROBPO43914 113 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 GALR3O60755 368 aaPredicted RBP2.88□□□□□ -1.95
CLK1-214ENST00000496205 N4BP1O75113 896 aaKnown RBP2.88□□□□□ -1.95
CLK1-214ENST00000496205 JCHAINP01591 159 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 OPN1LWP04000 364 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 CRYGBP07316 175 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 PABPC4LP0CB38 370 aaKnown RBP2.88□□□□□ -1.95
CLK1-214ENST00000496205 ANXA3P12429 323 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 TBXA2RP21731 343 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 UQCRC2P22695 453 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 GATA2P23769 480 aaPredicted RBP2.88□□□□□ -1.95
CLK1-214ENST00000496205 CD1BP29016 333 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 RPL4P36578 427 aaKnown RBP2.88□□□□□ -1.95
CLK1-214ENST00000496205 OR1D4P47884 311 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 STK19P49842 368 aaPredicted RBP2.88□□□□□ -1.95
CLK1-214ENST00000496205 RAB9AP51151 201 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 ARHGDIAP52565 204 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 PLA2G16P53816 162 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 C21orf59P57076 290 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 RGS8P57771 180 aaPredicted RBP2.88□□□□□ -1.95
CLK1-214ENST00000496205 YWHAGP61981 247 aaKnown RBP eCLIP2.88□□□□□ -1.95
CLK1-214ENST00000496205 MS4A2Q01362 244 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 TGM3Q08188 693 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 DNAJC3Q13217 504 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 ELAVL3Q14576 367 aaKnown RBP2.88□□□□□ -1.95
CLK1-214ENST00000496205 C6orf226Q5I0X4 101 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 KDM7AQ6ZMT4 941 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 DPY19L4Q7Z388 723 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 ANKRD37Q7Z713 158 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 LUZP2Q86TE4 346 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 P2RY8Q86VZ1 359 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 PARGQ86W56 976 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 LRRC49Q8IUZ0 686 aa2.88□□□□□ -1.95
CLK1-214ENST00000496205 CCDC50Q8IVM0 306 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms