RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 GPR137CQ8N3F9 429 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 OR2A12Q8NGT7 310 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 OR1F12Q8NHA8 337 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 GTSF1Q8WW33 167 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 MAIP1Q8WWC4 291 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 PIGCQ92535 297 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 CELF6Q96J87 481 aaKnown RBP4.1□□□□□ -1.75
SSR3-208ENST00000496050 PSKH2Q96QS6 385 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 CYP2S1Q96SQ9 504 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 PAXXQ9BUH6 204 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 GLIPR2Q9H4G4 154 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 SLC17A5Q9NRA2 495 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 SCML2Q9UQR0 700 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 USP16Q9Y5T5 823 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 FLVCR1Q9Y5Y0 555 aa4.1□□□□□ -1.75
SSR3-208ENST00000496050 TRAV26-1A0A087WT03 109 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 LOC100131303A0A0U1RQF7 123 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 ZNF208O43345 1280 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 ECI2O75521 394 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 SURF6O75683 361 aaKnown RBP4.09□□□□□ -1.75
SSR3-208ENST00000496050 OPN1MWP04001 364 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 OPN1MW2P0DN77 364 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 OPN1MW3P0DN78 364 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 IMPDH1P20839 514 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 LAP3P28838 519 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 YWHABP31946 246 aaKnown RBP4.09□□□□□ -1.75
SSR3-208ENST00000496050 CD80P33681 288 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 UGT1A3P35503 534 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 GRIA1P42261 906 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 STARP49675 285 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 CEBPDP49716 269 aaPredicted RBP4.09□□□□□ -1.75
SSR3-208ENST00000496050 P2RY4P51582 365 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 HNRNPA3P51991 378 aaKnown RBP4.09□□□□□ -1.75
SSR3-208ENST00000496050 DSCR10P59022 87 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 UBE2HP62256 183 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 FGL1Q08830 312 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 PRR4Q16378 134 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 DPYSL2Q16555 572 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 UTF1Q5T230 341 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 BEND3Q5T5X7 828 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 CCDC137Q6PK04 289 aaKnown RBP4.09□□□□□ -1.75
SSR3-208ENST00000496050 NLRP9Q7RTR0 991 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 UBQLNLQ8IYU4 475 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 OR51G2Q8NGK0 314 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 MRPS31Q92665 395 aaKnown RBP4.09□□□□□ -1.75
SSR3-208ENST00000496050 EFHD2Q96C19 240 aaPredicted RBP4.09□□□□□ -1.75
SSR3-208ENST00000496050 SLC39A3Q9BRY0 314 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 NIPSNAP3BQ9BS92 247 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 TMEM43Q9BTV4 400 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 SPATA16Q9BXB7 569 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 IKZF5Q9H5V7 419 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 UFSP2Q9NUQ7 469 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 NUDT15Q9NV35 164 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 OR1A1Q9P1Q5 309 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 APOBEC3BQ9UH17 382 aaKnown RBP4.09□□□□□ -1.75
SSR3-208ENST00000496050 CLEC4AQ9UMR7 237 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 PDE10AQ9Y233 779 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 RASD1Q9Y272 281 aa4.09□□□□□ -1.75
SSR3-208ENST00000496050 RALGAPA1Q6GYQ0 2036 aa4.09□□□□□ -1.76
SSR3-208ENST00000496050 LRP5LA4QPB2 252 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 TMEM110-MUSTN1A8MSY1 372 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 WWP2O00308 870 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 CDX4O14627 284 aaPredicted RBP4.08□□□□□ -1.76
SSR3-208ENST00000496050 PHOX2AO14813 284 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 TAPBPO15533 448 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 HCN1O60741 890 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 ZNF254O75437 659 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 RNH1P13489 461 aaKnown RBP4.08□□□□□ -1.76
SSR3-208ENST00000496050 CCDC130P13994 396 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 POLR2EP19388 210 aaKnown RBP4.08□□□□□ -1.76
SSR3-208ENST00000496050 HOXD10P28358 340 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 GCKP35557 465 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 KIR2DS2P43631 304 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 HCFC1P51610 2035 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 OC90Q02509 493 aaPredicted RBP4.08□□□□□ -1.76
SSR3-208ENST00000496050 KRTAP27-1Q3LI81 207 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 SLC25A52Q3SY17 297 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 SBK1Q52WX2 424 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 TP53I3Q53FA7 332 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 ZSCAN25Q6NSZ9 544 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 FAM199XQ6PEV8 388 aaPredicted RBP4.08□□□□□ -1.76
SSR3-208ENST00000496050 Q6ZPB1 254 aaPredicted RBP4.08□□□□□ -1.76
SSR3-208ENST00000496050 EFL1Q7Z2Z2 1120 aaKnown RBP4.08□□□□□ -1.76
SSR3-208ENST00000496050 GPR65Q8IYL9 337 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 BHLHE23Q8NDY6 225 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 OR13F1Q8NGS4 319 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 N4BP2L2Q92802 583 aaPredicted RBP4.08□□□□□ -1.76
SSR3-208ENST00000496050 FAF2Q96CS3 445 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 SLC41A3Q96GZ6 507 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 COQ2Q96H96 371 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 RBM14Q96PK6 669 aaKnown RBP4.08□□□□□ -1.76
SSR3-208ENST00000496050 ZBTB18Q99592 522 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 KIR2DL4Q99706 377 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 SLC35A5Q9BS91 424 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 CLSPNQ9HAW4 1339 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 IL36GQ9NZH8 169 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 WARS2Q9UGM6 360 aaKnown RBP4.08□□□□□ -1.76
SSR3-208ENST00000496050 ANGPTL2Q9UKU9 493 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 ERVW-1Q9UQF0 538 aa4.08□□□□□ -1.76
SSR3-208ENST00000496050 PLLPQ9Y342 182 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms