RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 KHNYNO15037 678 aaKnown RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 NADKO95544 446 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 SYPP08247 313 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 ANKRD34CP0C6C1 535 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 NPIPA8P0DM63 369 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 PRR23D2P0DMB1 279 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 PNMTP11086 282 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 UBL4AP11441 157 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 MAOAP21397 527 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 NOS3P29474 1203 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 SSTR4P31391 388 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 SLC15A1P46059 708 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 MTNR1AP48039 350 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 EMDP50402 254 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 ZNF136P52737 540 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 WNT4P56705 351 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 NRG3P56975 720 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 VBP1P61758 197 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 DAB2P98082 770 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 PSG6Q00889 435 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 RUNX1T1Q06455 604 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 LGALS3BPQ08380 585 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 MGAT2Q10469 447 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 BNIP3Q12983 259 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 MLLT11Q13015 90 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 IRF3Q14653 427 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 SPHARQ15513 63 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 TSTQ16762 297 aaKnown RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 SYT14P1Q58G82 188 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 ALG10BQ5I7T1 473 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 NKAIN2Q5VXU1 208 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 NXNL2Q5VZ03 156 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 LAIR1Q6GTX8 287 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 TMEM71Q6P5X7 295 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 SMARCD3Q6STE5 483 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 TMPRSS11AQ6ZMR5 421 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 SLC16A12Q6ZSM3 486 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 CXXC5Q7LFL8 322 aaKnown RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 MRGPREQ86SM8 312 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 GATAD2AQ86YP4 633 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 NKAIN4Q8IVV8 208 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 CADM2Q8N3J6 435 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 KLHL36Q8N4N3 616 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 METTL27Q8N6F8 245 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 IQCF1Q8N6M8 205 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 TMCO5AQ8N6Q1 288 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 Q8N9G6 341 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 OR4C6Q8NH72 309 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 TBC1D15Q8TC07 691 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 GRHL3Q8TE85 626 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 GAB3Q8WWW8 586 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 METTL21AQ8WXB1 218 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 SGCDQ92629 289 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 UFD1Q92890 307 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 UBE2FQ969M7 185 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 BPIFA2Q96DR5 249 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 LGALS12Q96DT0 336 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 HSPBAP1Q96EW2 488 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 RNFT2Q96EX2 444 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 LCORQ96JN0 433 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 SLC41A2Q96JW4 573 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 CEP19Q96LK0 163 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 ZNF582Q96NG8 517 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 DACH2Q96NX9 599 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 MGLLQ99685 303 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 SLC19A3Q9BZV2 496 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 SPRTNQ9H040 489 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 DCSTAMPQ9H295 470 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 MMP27Q9H306 513 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 OR52D1Q9H346 318 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 EGLN3Q9H6Z9 239 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 AMBNQ9NP70 447 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 EXOSC4Q9NPD3 245 aaKnown RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 ISYNA1Q9NPH2 558 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 UBQLN4Q9NRR5 601 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 FGF21Q9NSA1 209 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 UCKL1Q9NWZ5 548 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 IL20Q9NYY1 176 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 SEMA5BQ9P283 1151 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 CRNNQ9UBG3 495 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 AASSQ9UDR5 926 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 C19orf25Q9UFG5 118 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 KLHL21Q9UJP4 597 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 RARRES3Q9UL19 164 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 ATXN7L1Q9ULK2 861 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 GSTK1Q9Y2Q3 226 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 GPR55Q9Y2T6 319 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 MAU2Q9Y6X3 613 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 A3GALT2U3KPV4 340 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 ASCC3Q8N3C0 2202 aaKnown RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 ACACBO00763 2458 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 ASXL3Q9C0F0 2248 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 A0A0B4J2E0 115 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 LOC100506127A0A0U1RQW1 187 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 A0A1B0GTQ1 180 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 C2orf92A0A1B0GVN3 265 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 A0A1B0GX12 115 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 TMEM129A0AVI4 362 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SERINC4A6NH21 518 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SLC22A31A6NKX4 558 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms