RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	C15orf38-AP3S2	A0A0A6YYH1	394 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	TMEM247	A6NEH6	219 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	FAM220BP	B1ANY3	271 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	SHISA8	B8ZZ34	492 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	ETV2	O00321	342 aa	Predicted RBP	10.76	□□□□□ -0.69
APTX-233	ENST00000496030	EFNA2	O43921	213 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	MFN2	O95140	757 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	NTN1	O95631	604 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	PABPC4L	P0CB38	370 aa	Known RBP	10.76	□□□□□ -0.69
APTX-233	ENST00000496030	UBTFL6	P0CB48	400 aa	Predicted RBP	10.76	□□□□□ -0.69
APTX-233	ENST00000496030	ESRRA	P11474	423 aa	Predicted RBP	10.76	□□□□□ -0.69
APTX-233	ENST00000496030	IL7R	P16871	459 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	BMP7	P18075	431 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	HK1	P19367	917 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	AQP1	P29972	269 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	GSK3B	P49841	420 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	P2RX1	P51575	399 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	EEFSEC	P57772	596 aa	Known RBP	10.76	□□□□□ -0.69
APTX-233	ENST00000496030	CRYZ	Q08257	329 aa	Known RBP	10.76	□□□□□ -0.69
APTX-233	ENST00000496030	DMTN	Q08495	405 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	VEZF1	Q14119	521 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	PLPPR5	Q32ZL2	321 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	GLYR1	Q49A26	553 aa	Predicted RBP	10.76	□□□□□ -0.69
APTX-233	ENST00000496030	NHSL2	Q5HYW2	709 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	DCST1	Q5T197	706 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	MRPL2	Q5T653	305 aa	Known RBP	10.76	□□□□□ -0.69
APTX-233	ENST00000496030	RNF220	Q5VTB9	566 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	VASN	Q6EMK4	673 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	ARHGAP11A	Q6P4F7	1023 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030		Q6ZPB1	254 aa	Predicted RBP	10.76	□□□□□ -0.69
APTX-233	ENST00000496030	RINL	Q6ZS11	566 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	GDF7	Q7Z4P5	450 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	ARPIN	Q7Z6K5	226 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	GRAMD2A	Q8IUY3	354 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	TOR1AIP2	Q8NFQ8	470 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	OR5M1	Q8NGP8	315 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	OR5W2	Q8NH69	310 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	WDR60	Q8WVS4	1066 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	TAMM41	Q96BW9	452 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	TIMP4	Q99727	224 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	WFDC6	Q9BQY6	131 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	UGT2B28	Q9BY64	529 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	PTGES2	Q9H7Z7	377 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	EXOSC3	Q9NQT5	275 aa	Known RBP	10.76	□□□□□ -0.69
APTX-233	ENST00000496030	OSGIN2	Q9Y236	505 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030	SLC35A3	Q9Y2D2	325 aa		10.76	□□□□□ -0.69
APTX-233	ENST00000496030		A0A087WZY1	265 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	OR2M5	A3KFT3	312 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	C7orf72	A4D263	438 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	OR14I1	A6ND48	311 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030		B2RBV5	119 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030		M0QX08	132 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	AP3D1	O14617	1153 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	SLC19A2	O60779	497 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	UBOX5	O94941	541 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	STS	P08842	583 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	PRG2	P13727	222 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	HOXB4	P17483	251 aa	Predicted RBP	10.75	□□□□□ -0.69
APTX-233	ENST00000496030	TCEA1	P23193	301 aa	Known RBP	10.75	□□□□□ -0.69
APTX-233	ENST00000496030	PRKAR1B	P31321	381 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	PTGS2	P35354	604 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	ACAA2	P42765	397 aa	Known RBP	10.75	□□□□□ -0.69
APTX-233	ENST00000496030	SUMO3	P55854	103 aa	Predicted RBP	10.75	□□□□□ -0.69
APTX-233	ENST00000496030	DLX5	P56178	289 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	CLDN15	P56746	228 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	GANAB	Q14697	944 aa	Known RBP	10.75	□□□□□ -0.69
APTX-233	ENST00000496030	LARS2	Q15031	903 aa	Known RBP	10.75	□□□□□ -0.69
APTX-233	ENST00000496030	TOMM20	Q15388	145 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	DUSP7	Q16829	419 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	GLIPR1L2	Q4G1C9	344 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	LIN52	Q52LA3	116 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	SLC25A53	Q5H9E4	307 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	ZNF311	Q5JNZ3	666 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	DHRS4L2	Q6PKH6	230 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	C6orf89	Q6UWU4	347 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	DOLPP1	Q86YN1	238 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	MICU2	Q8IYU8	434 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	PGAM4	Q8N0Y7	254 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.75	□□□□□ -0.69
APTX-233	ENST00000496030	RBM15B	Q8NDT2	890 aa	Known RBP	10.75	□□□□□ -0.69
APTX-233	ENST00000496030	OR2T12	Q8NG77	320 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	GPR32P1	Q8NGA4	272 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	OR14L1P	Q8NHC6	308 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	FAM57A	Q8TBR7	257 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	LDAH	Q9H6V9	325 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	CD300A	Q9UGN4	299 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	DKKL1	Q9UK85	242 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	ZNF232	Q9UNY5	417 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	ANGPT4	Q9Y264	503 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	RPH3A	Q9Y2J0	694 aa	Predicted RBP	10.75	□□□□□ -0.69
APTX-233	ENST00000496030	AP3M1	Q9Y2T2	418 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	IFT52	Q9Y366	437 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	ZNF337	Q9Y3M9	751 aa		10.75	□□□□□ -0.69
APTX-233	ENST00000496030	ELOVL7	A1L3X0	281 aa		10.74	□□□□□ -0.69
APTX-233	ENST00000496030	PRORSD1P	A6NEY8	169 aa		10.74	□□□□□ -0.69
APTX-233	ENST00000496030	NPIPA2	E9PIF3	369 aa		10.74	□□□□□ -0.69
APTX-233	ENST00000496030	NPIPA3	F8WFD2	350 aa		10.74	□□□□□ -0.69
APTX-233	ENST00000496030	CYP7B1	O75881	506 aa		10.74	□□□□□ -0.69
APTX-233	ENST00000496030	PRKCA	P17252	672 aa		10.74	□□□□□ -0.69
APTX-233	ENST00000496030	IL11	P20809	199 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms