RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 CXCR2P25025 360 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 ZNF75DP51815 510 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 SMSP52788 366 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 SLC12A2P55011 1212 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 MLF1P58340 268 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 RPS15AP62244 130 aaKnown RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 ABATP80404 500 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 BASP1P80723 227 aaKnown RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 REEP5Q00765 189 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 RBPJQ06330 500 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 ACSM1Q08AH1 577 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 SNX1Q13596 522 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 PPA1Q15181 289 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 TPSAB1Q15661 275 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 PHKG1Q16816 387 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 MEP1AQ16819 746 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 SMU1Q2TAY7 513 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 DEFB113Q30KQ7 82 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 ANKRD20A4Q4UJ75 823 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 MIDNQ504T8 468 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 SFT2D3Q587I9 215 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 C6orf136Q5SQH8 315 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 SPINK14Q6IE38 97 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 C16orf47Q6ZP98 133 aaPredicted RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 ADCK2Q7Z695 626 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 AMIGO2Q86SJ2 522 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 CDC20BQ86Y33 519 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 CPNE9Q8IYJ1 553 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 RAB42Q8N4Z0 105 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 HORMAD2Q8N7B1 307 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 UBL4BQ8N7F7 174 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 PRELID2Q8N945 189 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 TMEM178AQ8NBL3 297 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 APCDD1LQ8NCL9 501 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 ZNF740Q8NDX6 193 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 NFAM1Q8NET5 270 aaPredicted RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 OR51Q1Q8NH59 317 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 M1APQ8TC57 530 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 MAGEC3Q8TD91 643 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 SKA2Q8WVK7 121 aaPredicted RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 C1orf54Q8WWF1 131 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 ZNF354BQ96LW1 612 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 FOPNLQ96NB1 174 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 ALS2CR12Q96Q35 445 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 OR4K3Q96R72 315 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 OR1F2PQ96R84 312 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 CYTH2Q99418 400 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 UTP23Q9BRU9 249 aaKnown RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 WDR83Q9BRX9 315 aaKnown RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 PCGF1Q9BSM1 259 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 PLA2G12AQ9BZM1 189 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 NPFFR1Q9GZQ6 430 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 PLAC1Q9HBJ0 212 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 MID1IP1Q9NPA3 183 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 HINT3Q9NQE9 182 aaKnown RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 CYSLTR2Q9NS75 346 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 INTS10Q9NVR2 710 aaKnown RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 CISD1Q9NZ45 108 aaKnown RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 CNIH4Q9P003 139 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 PAK5Q9P286 719 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 C19orf25Q9UFG5 118 aaPredicted RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 TEKT2Q9UIF3 430 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 ERVK-11Q9UQG0 969 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 NAALAD2Q9Y3Q0 740 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 ZNF407Q9C0G0 2248 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 ARID1AO14497 2285 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 RYR2Q92736 4967 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 ARHGAP21Q5T5U3 1957 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 A0A0B4J293 547 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 A0A0G2JK05 382 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 A0A1W2PPR1 153 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 HTR3EA5X5Y0 456 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 A8MUI8 341 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 TRIM77I1YAP6 450 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 PPP6CO00743 305 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 TXNDC9O14530 226 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 TTI1O43156 1089 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 NDUFS4O43181 175 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 PHF1O43189 567 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 PRKNO60260 465 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 UGDHO60701 494 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 KERAO60938 352 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 TBX6O95947 436 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 UQCRHP07919 91 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 FHP07954 510 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 HOXD4P09016 255 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 LINGO3P0C6S8 592 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 SLC35G6P0C7Q6 338 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 CDH1P12830 882 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 ICAM2P13598 275 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 ENO3P13929 434 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 ABOP16442 354 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 MAOAP21397 527 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 CHATP28329 748 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 PPP2R1BP30154 601 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 STIP1P31948 543 aaKnown RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 HSD17B2P37059 387 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 RFC3P40938 356 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 CETN2P41208 172 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 AVPR1BP47901 424 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms