RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	GPC6	Q9Y625	555 aa	Predicted RBP	9.82	□□□□□ -0.84
DCTN1-223	ENST00000495643		A6NNC1	897 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	RFXANK	O14593	260 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	CXCL13	O43927	109 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	BCAS1	O75363	584 aa	Predicted RBP	9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	H6PD	O95479	791 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	CSTA	P01040	98 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	ZCCHC18	P0CG32	403 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	CD8B	P10966	210 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	EPX	P11678	715 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	SFTPD	P35247	375 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	PGM1	P36871	562 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	CPA2	P48052	419 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	IDH3A	P50213	366 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	POLR2J	P52435	117 aa	Known RBP	9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	MVD	P53602	400 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	CHRNE	Q04844	493 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	CBFB	Q13951	182 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	QPRT	Q15274	297 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	MAPK11	Q15759	364 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	SYPL1	Q16563	259 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	HBM	Q6B0K9	141 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	ZNF474	Q6S9Z5	364 aa	Predicted RBP	9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	EIF3M	Q7L2H7	374 aa	Known RBP	9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	FAM214B	Q7L5A3	538 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	TMEM200A	Q86VY9	491 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	ZNF619	Q8N2I2	560 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	MIER2	Q8N344	545 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	TMCO5A	Q8N6Q1	288 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	ANKFN1	Q8N957	763 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	ZFP90	Q8TF47	636 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	OSTF1	Q92882	214 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	KLHL15	Q96M94	604 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	EBF4	Q9BQW3	602 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	OPN3	Q9H1Y3	402 aa	Predicted RBP	9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	SLC38A1	Q9H2H9	487 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	TCF7L2	Q9NQB0	619 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	RASSF1	Q9NS23	344 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	ARGLU1	Q9NWB6	273 aa	Predicted RBP	9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	MCTS1	Q9ULC4	181 aa	Known RBP	9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	LIPT1	Q9Y234	373 aa		9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	MAP1A	P78559	2803 aa	Predicted RBP	9.81	□□□□□ -0.84
DCTN1-223	ENST00000495643	FAM234B	A2RU67	622 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	SS18L1	O75177	396 aa	Predicted RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	SMNDC1	O75940	238 aa	Known RBP eCLIP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	SASH3	O75995	380 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	SYNGR4	O95473	234 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	KRT75	O95678	551 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	CHRM4	P08173	479 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	UBTFL6	P0CB48	400 aa	Predicted RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	MAGEA8	P43361	318 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	ANXA11	P50995	505 aa	Known RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	CCR4	P51679	360 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	CARD18	P57730	90 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	PPP2R2A	P63151	447 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	SIRPA	P78324	504 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	KCNJ10	P78508	379 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	PLAUR	Q03405	335 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	FAM27E3	Q08E93	113 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	TMEM176B	Q3YBM2	270 aa	Predicted RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	GPAT3	Q53EU6	434 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	PDSS1	Q5T2R2	415 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	LRRC74B	Q6ZQY2	392 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	ZNF610	Q8N9Z0	462 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	PNPT1	Q8TCS8	783 aa	Known RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	ST8SIA1	Q92185	356 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	PMM1	Q92871	262 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	VPS33A	Q96AX1	596 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	GMPPA	Q96IJ6	420 aa	Predicted RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	ITCH	Q96J02	903 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	GPATCH1	Q9BRR8	931 aa	Known RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	CCDC28B	Q9BUN5	200 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	POLDIP3	Q9BY77	421 aa	Known RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	PRRG4	Q9BZD6	226 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	QRSL1	Q9H0R6	528 aa	Known RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	RMND5A	Q9H871	391 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	COQ10B	Q9H8M1	238 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	PLSCR4	Q9NRQ2	329 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	INTS9	Q9NV88	658 aa	Known RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	DNAJB12	Q9NXW2	375 aa	Known RBP	9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	SLC35A3	Q9Y2D2	325 aa		9.8	□□□□□ -0.84
DCTN1-223	ENST00000495643	AGAP5	A6NIR3	686 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	CLDN24	A6NM45	220 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	GJE1	A6NN92	205 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	POLR3G	O15318	223 aa	Predicted RBP	9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	ADAM11	O75078	769 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	CYP7B1	O75881	506 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	HOXB9	P17482	250 aa	Predicted RBP	9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	PGC	P20142	388 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	RPS4Y1	P22090	263 aa	Known RBP	9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	CPOX	P36551	454 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	CD79B	P40259	229 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	AQP5	P55064	265 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	SESN3	P58005	492 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	SELENBP1	Q13228	472 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	TESK1	Q15569	626 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	ZNF239	Q16600	458 aa	Known RBP	9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	GTDC1	Q4AE62	458 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	TIGD2	Q4W5G0	525 aa		9.79	□□□□□ -0.84
DCTN1-223	ENST00000495643	PPP4R4	Q6NUP7	873 aa		9.79	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms