RNA–Protein interactions for RNA: ENST00000495300.1

PBX2-204, Transcript of PBX homeobox 2, human

TSL 3

Gene PBX2, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBX2-204	ENST00000495300	ETS2	P15036	469 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	IL11	P20809	199 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	TIMP3	P35625	211 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	TPD52	P55327	224 aa	Predicted RBP	12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	CLDN20	P56880	219 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	CDK6	Q00534	326 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	SRY	Q05066	204 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	FOXF1	Q12946	379 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	QPRT	Q15274	297 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	MMEL1	Q495T6	779 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	MRPL2	Q5T653	305 aa	Known RBP	12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	RNF220	Q5VTB9	566 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	NSUN5P2	Q63ZY6	315 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	REEP3	Q6NUK4	255 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	XKRX	Q6PP77	449 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	ZNF836	Q6ZNA1	936 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	SERPINA11	Q86U17	422 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	GGN	Q86UU5	652 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	VRK2	Q86Y07	508 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	GRAMD2A	Q8IUY3	354 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	OR8J3	Q8NGG0	315 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	OR52P1P	Q8NH57	321 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	NFKBID	Q8NI38	313 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	BBS10	Q8TAM1	723 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	ADGRG7	Q96K78	797 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	MRGPRX4	Q96LA9	322 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	CCT8L2	Q96SF2	557 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	RLIM	Q9NVW2	624 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	CLCF1	Q9UBD9	225 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300	ADAM21	Q9UKJ8	722 aa		12.36	□□□□□ -0.43
PBX2-204	ENST00000495300		A0A0G2JNJ9	132 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	MBD3L3	A6NE82	208 aa	Predicted RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	FAM47E-STBD1	D6RA91	191 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300		H3BML4	177 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	FAAH	O00519	579 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	GCM2	O75603	506 aa	Predicted RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	NUDT14	O95848	222 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	PABPC4L	P0CB38	370 aa	Known RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	POU3F2	P20265	443 aa	Predicted RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	SLC6A2	P23975	617 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	ELK4	P28324	431 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	CEACAM8	P31997	349 aa	Predicted RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	SMS	P52788	366 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	PCBP3	P57721	371 aa	Known RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	RAC1	P63000	192 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	RBBP4	Q09028	425 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	SCARB2	Q14108	478 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.35	□□□□□ -0.43	3e-6	■■■□□ 15.4
PBX2-204	ENST00000495300	CTU2	Q2VPK5	515 aa	Known RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	LIN52	Q52LA3	116 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	RABL3	Q5HYI8	236 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	RIPPLY2	Q5TAB7	128 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	C8orf82	Q6P1X6	216 aa	Predicted RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	CALHM3	Q86XJ0	350 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	LACC1	Q8IV20	430 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	CLIP4	Q8N3C7	705 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	TMCO5A	Q8N6Q1	288 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	ANKS4B	Q8N8V4	417 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	PCYOX1L	Q8NBM8	494 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	OR10A6	Q8NH74	314 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	FBXO27	Q8NI29	283 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	ST8SIA1	Q92185	356 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	RND1	Q92730	232 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	RCN3	Q96D15	328 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	GPATCH1	Q9BRR8	931 aa	Known RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	SPATA9	Q9BWV2	254 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	GID8	Q9NWU2	228 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300		Q9UFV3	132 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	RNF6	Q9Y252	685 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	ZNF443	Q9Y2A4	671 aa	Predicted RBP	12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	ARL2BP	Q9Y2Y0	163 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	IFT52	Q9Y366	437 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	DOPEY2	Q9Y3R5	2298 aa		12.35	□□□□□ -0.43
PBX2-204	ENST00000495300	ASH1L	Q9NR48	2969 aa	Known RBP	12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	DOCK7	Q96N67	2140 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	CLCA1	A8K7I4	914 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	C5orf58	C9J3I9	102 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300		H0Y3Z8	333 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	ADAMDEC1	O15204	470 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	CYP7B1	O75881	506 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	FAM107A	O95990	144 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	PGC	P20142	388 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	PRDX6	P30041	224 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	ACAA2	P42765	397 aa	Known RBP	12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	SLC6A8	P48029	635 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	CCR4	P51679	360 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	SESN3	P58005	492 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	LARS2	Q15031	903 aa	Known RBP	12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	ZSWIM7	Q19AV6	140 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	POMZP3	Q6PJE2	187 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	ZZZ3	Q8IYH5	903 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	UBQLNL	Q8IYU4	475 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	C11orf65	Q8NCR3	313 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	NAXE	Q8NCW5	288 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	HIPK4	Q8NE63	616 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	TNIP2	Q8NFZ5	429 aa		12.34	□□□□□ -0.43
PBX2-204	ENST00000495300	ZNF583	Q96ND8	569 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms