RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 SNX1Q13596 522 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 HSP90AA5PQ58FG0 334 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 PDSS1Q5T2R2 415 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 FAM219BQ5XKK7 198 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 SSX8Q7RTT4 187 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 GALNT5Q7Z7M9 940 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 OR7G3Q8NG95 312 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 HUS1BQ8NHY5 278 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 ANKRD7Q92527 254 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 PTCD3Q96EY7 689 aaKnown RBP7.54□□□□□ -1.2
GARNL3-219ENST00000495172 CDK15Q96Q40 435 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 KCNS3Q9BQ31 491 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 SLC30A2Q9BRI3 323 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 MRPL37Q9BZE1 423 aaKnown RBP7.54□□□□□ -1.2
GARNL3-219ENST00000495172 WDR41Q9HAD4 459 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 SAYSD1Q9NPB0 183 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 SDHAF3Q9NRP4 125 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 C20orf96Q9NUD7 363 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-219ENST00000495172 TAS2R13Q9NYV9 303 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 UBAP1Q9NZ09 502 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 KLHL9Q9P2J3 617 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 STOML1Q9UBI4 398 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 REV1Q9UBZ9 1251 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 CFL2Q9Y281 166 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 OR10H1Q9Y4A9 318 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 OR6C65A6NJZ3 312 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 TRIM49D1C9J1S8 452 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 PDLIM1O00151 329 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 AKR1B10O60218 316 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 IGKV1D-16P01601 117 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 CRYAAP02489 173 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 SMCPP49901 116 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-219ENST00000495172 TMEM33P57088 247 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 SEC61A1P61619 476 aaKnown RBP7.53□□□□□ -1.2
GARNL3-219ENST00000495172 IRF8Q02556 426 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 ZNF154Q13106 437 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 NR1I3Q14994 352 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 PDCD1Q15116 288 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 TSNQ15631 228 aaKnown RBP7.53□□□□□ -1.2
GARNL3-219ENST00000495172 GRAMD1BQ3KR37 738 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 NRN1LQ496H8 165 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 ANKRD16Q6P6B7 361 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 Q6ZSV7 163 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 GSPT2Q8IYD1 628 aaKnown RBP7.53□□□□□ -1.2
GARNL3-219ENST00000495172 AGGF1Q8N302 714 aaeCLIP7.53□□□□□ -1.2
GARNL3-219ENST00000495172 PARP8Q8N3A8 854 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 APH1AQ96BI3 265 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 WDR34Q96EX3 536 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 SLC47A1Q96FL8 570 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 CMTM7Q96FZ5 175 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 SERPINB12Q96P63 405 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 OCSTAMPQ9BR26 566 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 LRRC1Q9BTT6 524 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 OXSMQ9NWU1 459 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 NKX1-2Q9UD57 310 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-219ENST00000495172 PURGQ9UJV8 347 aaKnown RBP7.53□□□□□ -1.2
GARNL3-219ENST00000495172 CES1P1Q9UKY3 287 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 FOXJ3Q9UPW0 622 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 AMDHD2Q9Y303 409 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.53□□□□□ -1.2
GARNL3-219ENST00000495172 WIPI2Q9Y4P8 454 aa7.53□□□□□ -1.2
GARNL3-219ENST00000495172 DNAH10Q8IVF4 4471 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 IGLV3-32A0A0A0MS00 114 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 TRAV40A0A0B4J280 105 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 OIP5O43482 229 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 GPR137BO60478 399 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 CYTIPO60759 359 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 ERLIN1O75477 346 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 UTS2O95399 124 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 ENO2P09104 434 aaPredicted RBP7.52□□□□□ -1.21
GARNL3-219ENST00000495172 MTNR1AP48039 350 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 PRIM2P49643 509 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 VPS41P49754 854 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 PRPS1P60891 318 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 BASP1P80723 227 aaKnown RBP7.52□□□□□ -1.21
GARNL3-219ENST00000495172 SLC18A2Q05940 514 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 CDK5R2Q13319 367 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 TOMM34Q15785 309 aaPredicted RBP7.52□□□□□ -1.21
GARNL3-219ENST00000495172 NSUN5P1Q3KNT7 163 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 SLC9B1Q4ZJI4 515 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 NKAPLQ5M9Q1 402 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 ZBTB37Q5TC79 503 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 OR7E24Q6IFN5 339 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 KRT80Q6KB66 452 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 TRABD2AQ86V40 505 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 GAS2L3Q86XJ1 694 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 OR52E2Q8NGJ4 325 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 OR9A2Q8NGT5 310 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 C1orf54Q8WWF1 131 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 RAB39BQ96DA2 213 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 SIGLEC10Q96LC7 697 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 ASCL2Q99929 193 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 TBL1XR1Q9BZK7 514 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 PITHD1Q9GZP4 211 aaPredicted RBP7.52□□□□□ -1.21
GARNL3-219ENST00000495172 MMP28Q9H239 520 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 DENND2DQ9H6A0 471 aaPredicted RBP7.52□□□□□ -1.21
GARNL3-219ENST00000495172 ACSS3Q9H6R3 686 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 TIGARQ9NQ88 270 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 SLC7A10Q9NS82 523 aa7.52□□□□□ -1.21
GARNL3-219ENST00000495172 RPUSD1Q9UJJ7 312 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms