RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 C16orf58Q96GQ5 468 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 ITCHQ96J02 903 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 LRGUKQ96M69 825 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 CCDC115Q96NT0 180 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 OR52E6Q96RD3 313 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 TM9SF2Q99805 663 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 KCTD14Q9BQ13 255 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 TACO1Q9BSH4 297 aaKnown RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 BTBD2Q9BX70 525 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 ACTRT3Q9BYD9 372 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 PIGUQ9H490 435 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 CXorf36Q9H7Y0 433 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 MCCC2Q9HCC0 563 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 MED11Q9P086 117 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 SLAMF8Q9P0V8 285 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 FOXD3Q9UJU5 478 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 RPH3AQ9Y2J0 694 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 SNX8Q9Y5X2 465 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 PDZD2O15018 2839 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 MYO9AB2RTY4 2548 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 A0A1W2PQD3 144 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 ENO4A6NNW6 628 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 CLCA1A8K7I4 914 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 ACADSP16219 412 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 HK1P19367 917 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 ATP6V1B2P21281 511 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 SLC7A1P30825 629 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 OPRM1P35372 400 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 DLX5P56178 289 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 LRRC74AQ0VAA2 488 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 TP53BP2Q13625 1128 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 FIGNL1Q6PIW4 674 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 ZAR1Q86SH2 424 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 LURAP1LQ8IV03 231 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 MISPQ8IVT2 679 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 OR4C3Q8NH37 302 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 DNAJC9Q8WXX5 260 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 WNT2BQ93097 391 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 PIGQQ9BRB3 760 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 YIPF4Q9BSR8 244 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 PAIP1Q9H074 479 aaKnown RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 UBQLN4Q9NRR5 601 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 GPATCH2Q9NW75 528 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 VAPAQ9P0L0 249 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 MAGEL2Q9UJ55 1249 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 RIMS3Q9UJD0 308 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 OR2M5A3KFT3 312 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 SYT5O00445 386 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 RNASET2O00584 256 aaKnown RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 ARPC2O15144 300 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 NDUFB5O43674 189 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 RCBTB2O95199 551 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 GPIP06744 558 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 TMIGD3P0DMS9 266 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 ZNF17P17021 662 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 POU3F2P20265 443 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 TCEA1P23193 301 aaKnown RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 STARP49675 285 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 HBA1P69905 142 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 PHC1P78364 1004 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 SRYQ05066 204 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 TMEM44Q2T9K0 475 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 SPDYE7PQ495Y7 208 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 RUNDC3AQ59EK9 446 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 MTX3Q5HYI7 312 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 OGFRL1Q5TC84 451 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 BHLHB9Q6PI77 547 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 ARSKQ6UWY0 536 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 GALNT10Q86SR1 603 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 MSRB3Q8IXL7 192 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 NUDT8Q8WV74 236 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 CDS1Q92903 461 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 RNASE6Q93091 150 aaKnown RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 OTUB1Q96FW1 271 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 ZNF184Q99676 751 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 ZNF559Q9BR84 538 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 CPPED1Q9BRF8 314 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 SFXN3Q9BWM7 321 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 ARMC1Q9NVT9 282 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 FBXO34Q9NWN3 711 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 SLC25A37Q9NYZ2 338 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 JKAMPQ9P055 326 aa11.91□□□□□ -0.5
ERCC3-209ENST00000494464 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 FAF1Q9UNN5 650 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-209ENST00000494464 PCNX3Q9H6A9 2034 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 A0A087WZY1 265 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 C7orf72A4D263 438 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 FAM220BPB1ANY3 271 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 SCDO00767 359 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 ATP6V1C1P21283 382 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 MTPNP58546 118 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 EEF1A1P68104 462 aaKnown RBP11.9□□□□□ -0.5
ERCC3-209ENST00000494464 MYBPHQ13203 477 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 SELPLGQ14242 412 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 TAF11Q15544 211 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 PGS1Q32NB8 556 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 DCST2Q5T1A1 773 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 CCNJQ5T5M9 372 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 EEF1A1P5Q5VTE0 462 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 OR4F3Q6IEY1 312 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms