RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 LRRC74AQ0VAA2 488 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 SF3A3Q12874 501 aaKnown RBP eCLIP13.19□□□□□ -0.32e-7■■■□□ 17.4
ATG4B-224ENST00000494132 CBFBQ13951 182 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 RPS26P11Q5JNZ5 115 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-224ENST00000494132 HBMQ6B0K9 141 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 BTLAQ7Z6A9 289 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 TMEM200AQ86VY9 491 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 OR5W2Q8NH69 310 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 OR2V1Q8NHB1 315 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 LRRC46Q96FV0 321 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 ITCHQ96J02 903 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 KLHL15Q96M94 604 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 CCDC28BQ9BUN5 200 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 RBM24Q9BX46 236 aaKnown RBP13.19□□□□□ -0.3
ATG4B-224ENST00000494132 LAT2Q9GZY6 243 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 SAP130Q9H0E3 1048 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 OPN3Q9H1Y3 402 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-224ENST00000494132 SLC38A1Q9H2H9 487 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 ACBD3Q9H3P7 528 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 TPT1P8Q9HAU6 139 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 MCCC2Q9HCC0 563 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 NPHS2Q9NP85 383 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 GALNT8Q9NY28 637 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 PACSIN3Q9UKS6 424 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 GPC6Q9Y625 555 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-224ENST00000494132 PRR14LQ5THK1 2151 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 BCHEP06276 602 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 EIF1P41567 113 aaKnown RBP13.18□□□□□ -0.3
ATG4B-224ENST00000494132 KIR2DL2P43627 348 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-224ENST00000494132 MAPK11Q15759 364 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 TMEM176BQ3YBM2 270 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-224ENST00000494132 OR2A2Q6IF42 318 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 ESPNLQ6ZVH7 1005 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 EIF3MQ7L2H7 374 aaKnown RBP13.18□□□□□ -0.3
ATG4B-224ENST00000494132 ROBO4Q8WZ75 1007 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 NRGNQ92686 78 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 GTF2H4Q92759 462 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 STARD4Q96DR4 205 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 DNAJA3Q96EY1 480 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 SRXN1Q9BYN0 137 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 PAIP1Q9H074 479 aaKnown RBP13.18□□□□□ -0.3
ATG4B-224ENST00000494132 RNF122Q9H9V4 155 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 POLE3Q9NRF9 147 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 SLAMF8Q9P0V8 285 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 STOML1Q9UBI4 398 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 KCNN3Q9UGI6 736 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 ZNF175Q9Y473 711 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 PCDHB14Q9Y5E9 798 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 SPG11Q96JI7 2443 aa13.18□□□□□ -0.3
ATG4B-224ENST00000494132 A0A1W2PNR3 127 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 EDF1O60869 148 aaKnown RBP13.17□□□□□ -0.3
ATG4B-224ENST00000494132 ADAM11O75078 769 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 NUDT7P0C024 238 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 NCF2P19878 526 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-224ENST00000494132 CAPN3P20807 821 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 ELK4P28324 431 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 ANXA11P50995 505 aaKnown RBP13.17□□□□□ -0.3
ATG4B-224ENST00000494132 SESN3P58005 492 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 DSTNP60981 165 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 AGKQ53H12 422 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 PAGE3Q5JUK9 113 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 BLOC1S3Q6QNY0 202 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 LRRC74BQ6ZQY2 392 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 MSANTD1Q6ZTZ1 278 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 ZNF563Q8TA94 476 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 WDR60Q8WVS4 1066 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 CNOT9Q92600 299 aaKnown RBP13.17□□□□□ -0.3
ATG4B-224ENST00000494132 OSTF1Q92882 214 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 SPDL1Q96EA4 605 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 MRGPRX4Q96LA9 322 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 TRNT1Q96Q11 434 aaKnown RBP13.17□□□□□ -0.3
ATG4B-224ENST00000494132 GPATCH1Q9BRR8 931 aaKnown RBP13.17□□□□□ -0.3
ATG4B-224ENST00000494132 PIGMQ9H3S5 423 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 COQ10BQ9H8M1 238 aa13.17□□□□□ -0.3
ATG4B-224ENST00000494132 MCTS1Q9ULC4 181 aaKnown RBP13.17□□□□□ -0.3
ATG4B-224ENST00000494132 ANKRD17O75179 2603 aaKnown RBP13.17□□□□□ -0.3
ATG4B-224ENST00000494132 UQCRHLA0A096LP55 91 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 IGHV3-15A0A0B4J1V0 119 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 A0A0G2JND7 137 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 TUBAL3A6NHL2 446 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 A8MXE2 369 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 AP3D1O14617 1153 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 ADAMDEC1O15204 470 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 SYNGR4O95473 234 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 NTN1O95631 604 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 PLGP00747 810 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-224ENST00000494132 ZCCHC18P0CG32 403 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 FCGR2AP12318 317 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 PGCP20142 388 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 KLK2P20151 261 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 ADH6P28332 368 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 CARD18P57730 90 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 KCNJ10P78508 379 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 FAM27E3Q08E93 113 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 MERTKQ12866 999 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 SELENBP1Q13228 472 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 ZNF474Q6S9Z5 364 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-224ENST00000494132 VRK2Q86Y07 508 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 MSRB3Q8IXL7 192 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms