RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 SERINC1Q9NRX5 453 aa11.96□□□□□ -0.49
CTDSP1-212ENST00000494067 EXD2Q9NVH0 621 aa11.96□□□□□ -0.49
CTDSP1-212ENST00000494067 ASIC5Q9NY37 505 aa11.96□□□□□ -0.49
CTDSP1-212ENST00000494067 ICAM5Q9UMF0 924 aa11.96□□□□□ -0.49
CTDSP1-212ENST00000494067 HEATR5AQ86XA9 2040 aa11.96□□□□□ -0.5
CTDSP1-212ENST00000494067 STX11O75558 287 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 CYP7B1O75881 506 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 NTN1O95631 604 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 AGTR1P30556 359 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 ABCE1P61221 599 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 FUT5Q11128 374 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 SELENBP1Q13228 472 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 GPR68Q15743 365 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 ZNF239Q16600 458 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 Q5PR19 223 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 ANXA8L1Q5VT79 327 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 PRSS57Q6UWY2 283 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 STAC2Q6ZMT1 411 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 C16orf62Q7Z3J2 963 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 C6orf120Q7Z4R8 191 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 CXorf67Q86X51 503 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 WFDC8Q8IUA0 241 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 SLC43A2Q8N370 569 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 OR5W2Q8NH69 310 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 TMEM234Q8WY98 164 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 SLC35G5Q96KT7 338 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 TEX37Q96LM6 180 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 SDF2Q99470 211 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 USB1Q9BQ65 265 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 DPY30Q9C005 99 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 GSX1Q9H4S2 264 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 GP6Q9HCN6 339 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 NGBQ9NPG2 151 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 PNPOQ9NVS9 261 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 RAB21Q9UL25 225 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 ABCA4P78363 2273 aa11.95□□□□□ -0.5
CTDSP1-212ENST00000494067 RNF103-CHMP3A0A140T963 221 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 PRAMEF27A3QJZ7 478 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 RNASET2O00584 256 aaKnown RBP11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 TM9SF1O15321 606 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 BIRC5O15392 142 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 ZNF500O60304 480 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 FCMRO60667 390 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 ALDOCP09972 364 aaKnown RBP11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 PRKCAP17252 672 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 IL32P24001 234 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 MAPK14Q16539 360 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 PDZK1Q5T2W1 519 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 CLEC9AQ6UXN8 241 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 FCRLAQ7L513 359 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 CROCCP2Q86T23 111 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 ANKRD46Q86W74 232 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 OR4A15Q8NGL6 344 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 GPR119Q8TDV5 335 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 RNF128Q8TEB7 428 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 ZFP90Q8TF47 636 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 TMEM171Q8WVE6 324 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 NMUR2Q9GZQ4 415 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 CENPHQ9H3R5 247 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 CXorf56Q9H5V9 222 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 COQ10BQ9H8M1 238 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 KLHL9Q9P2J3 617 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 KLHL13Q9P2N7 655 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 HAO1Q9UJM8 370 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 RAP2CQ9Y3L5 183 aa11.94□□□□□ -0.5
CTDSP1-212ENST00000494067 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 SERINC4A6NH21 518 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 C9JVG2 144 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 TMCC2O75069 709 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 CSTAP01040 98 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 YES1P07947 543 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 PGCP20142 388 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 PSMB1P20618 241 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 EDNRAP25101 427 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 SLC1A6P48664 564 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 RPL14P50914 215 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 WDR4P57081 412 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 RAC3P60763 192 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 QPRTQ15274 297 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 ARHGAP11BQ3KRB8 267 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 ALKBH2Q6NS38 261 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 C3orf33Q6P1S2 294 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 ZNF704Q6ZNC4 412 aaPredicted RBP11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 HMGN2P46Q86SG4 172 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 TUSC5Q8IXB3 177 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 OR8J2Q8NGG1 315 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 ZNF563Q8TA94 476 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 ABHD3Q8WU67 409 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 OIT3Q8WWZ8 545 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 PERPQ96FX8 193 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 PLPPR2Q96GM1 343 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 SMR3AQ99954 134 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 THUMPD3Q9BV44 507 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 NUF2Q9BZD4 464 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 LAT2Q9GZY6 243 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 SSU72Q9NP77 194 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 KCNK9Q9NPC2 374 aa11.93□□□□□ -0.5
CTDSP1-212ENST00000494067 ING1Q9UK53 422 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms