RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 MT-ND5P03915 603 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 CHRM4P08173 479 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 C1GALT1C1LP0DN25 315 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 VSIG10L2P0DP72 767 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 TYRP14679 529 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 FUT1P19526 365 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 MAT2AP31153 395 aaKnown RBP10.87□□□□□ -0.67
HDAC4-210ENST00000493582 IFNGR2P38484 337 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 ADH7P40394 386 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 GCGRP47871 477 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 PRR5P85299 388 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 PRAMEF13Q5VWM6 474 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 FAM83HQ6ZRV2 1179 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-210ENST00000493582 OR5J2Q8NH18 312 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 STK35Q8TDR2 534 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 SFT2D1Q8WV19 159 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 VOPP1Q96AW1 172 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 ALG14Q96F25 216 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 LRIG1Q96JA1 1093 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 NDC1Q9BTX1 674 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 TEX12Q9BXU0 123 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 BCL2L14Q9BZR8 327 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 AP5M1Q9H0R1 490 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 ABRACLQ9P1F3 81 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 NOSIPQ9Y314 301 aaKnown RBP10.87□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF106Q9H2Y7 1883 aaKnown RBP10.87□□□□□ -0.67
HDAC4-210ENST00000493582 CDC42EP2O14613 210 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 GOSR2O14653 212 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 FLRT2O43155 660 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 NDUFS6O75380 124 aaKnown RBP10.87□□□□□ -0.67
HDAC4-210ENST00000493582 PCDH8O95206 1070 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 SERPIND1P05546 499 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 ACAA1P09110 424 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-210ENST00000493582 ALPPL2P10696 532 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 ACADLP28330 430 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 SERPINA4P29622 427 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 HOXC8P31273 242 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 DLX5P56178 289 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 CLDN12P56749 244 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 CSRP2Q16527 193 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 HES5Q5TA89 166 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 CXCL17Q6UXB2 119 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 CCDC36Q8IYA8 594 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 OR2T33Q8NG76 320 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 PIGXQ8TBF5 258 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 NXPE3Q969Y0 559 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 CRB3Q9BUF7 120 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 TINAGL1Q9GZM7 467 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-210ENST00000493582 ENKD1Q9H0I2 346 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 OR51V1Q9H2C8 321 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 FN3KQ9H479 309 aa10.87□□□□□ -0.67
HDAC4-210ENST00000493582 BARX1Q9HBU1 254 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-210ENST00000493582 DENND4AQ7Z401 1863 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 A0A0G2JPF8 293 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 OR6C68A6NDL8 312 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF840PA6NDX5 716 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 HNRNPCL3B7ZW38 293 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 CACNB4O00305 520 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-210ENST00000493582 F12P00748 615 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-210ENST00000493582 HNRNPCL4P0DMR1 293 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 MPGP29372 298 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 CTSOP43234 321 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-210ENST00000493582 SPINT3P49223 89 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 PRMT2P55345 433 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF805Q5CZA5 627 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 TMEM17Q86X19 198 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 SLC44A3Q8N4M1 653 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 C12orf45Q8N5I9 185 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-210ENST00000493582 OR1M1Q8NGA1 313 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 SLC25A32Q9H2D1 315 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 UBQLN3Q9H347 655 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 GSN-AS1Q9NRJ2 163 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 MOKQ9UQ07 419 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 PLXNB3Q9ULL4 1909 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 USP34Q70CQ2 3546 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 CTDSPLO15194 276 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 ASGR2P07307 311 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 PPP2R1BP30154 601 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 STARP49675 285 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 ART1P52961 327 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 UBE2IP63279 158 aaKnown RBP10.86□□□□□ -0.67
HDAC4-210ENST00000493582 GPNMBQ14956 572 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 MAPK14Q16539 360 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 TMEM44Q2T9K0 475 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 MANEAQ5SRI9 462 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF697Q5TEC3 545 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 FCRLBQ6BAA4 426 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 MEPCEQ7L2J0 689 aaKnown RBP10.86□□□□□ -0.67
HDAC4-210ENST00000493582 FBXO22Q8NEZ5 403 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 OR6K3Q8NGY3 331 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 TM4SF18Q96CE8 201 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 MS4A4EQ96PG1 132 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 WDR13Q9H1Z4 485 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 CCDC86Q9H6F5 360 aaKnown RBP10.86□□□□□ -0.67
HDAC4-210ENST00000493582 KLHL9Q9P2J3 617 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 TINAGQ9UJW2 476 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 CLEC4EQ9ULY5 219 aa10.86□□□□□ -0.67
HDAC4-210ENST00000493582 CDHR4A6H8M9 788 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 F5H5P2 479 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 SOCS5O75159 536 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms