RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 FRKP42685 505 aaPredicted RBP15.57■□□□□ 0.08
NUP50-218ENST00000493456 EFNA4P52798 201 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 EXOSC6Q5RKV6 272 aaKnown RBP15.57■□□□□ 0.08
NUP50-218ENST00000493456 CCNJQ5T5M9 372 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 LIPNQ5VXI9 398 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 C8orf74Q6P047 294 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 CBLN3Q6UW01 205 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 ZNF572Q7Z3I7 529 aaPredicted RBP15.57■□□□□ 0.08
NUP50-218ENST00000493456 GALNT5Q7Z7M9 940 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 ZNF100Q8IYN0 542 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 ATP6V1C2Q8NEY4 427 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 JADE3Q92613 823 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 HTRA1Q92743 480 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 ARL8AQ96BM9 186 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 EGLN2Q96KS0 407 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 ZNF300Q96RE9 604 aaPredicted RBP15.57■□□□□ 0.08
NUP50-218ENST00000493456 STACQ99469 402 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 HOXD1Q9GZZ0 328 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 DUSP22Q9NRW4 184 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 ACSS1Q9NUB1 689 aaPredicted RBP15.57■□□□□ 0.08
NUP50-218ENST00000493456 CARD8Q9Y2G2 431 aa15.57■□□□□ 0.08
NUP50-218ENST00000493456 SMAD9O15198 467 aaKnown RBP15.56■□□□□ 0.08
NUP50-218ENST00000493456 PGRP06401 933 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 ATP6V1C1P21283 382 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 PRPH2P23942 346 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 EDNRAP25101 427 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 NAA20P61599 178 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 SPOCK1Q08629 439 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 SLC25A53Q5H9E4 307 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 FAM120AOSQ5T036 256 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 ANKRD26P1Q6NSI1 321 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 C3orf33Q6P1S2 294 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 TIFABQ6ZNK6 161 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 GPR119Q8TDV5 335 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 ZNF75CPQ92670 426 aaPredicted RBP15.56■□□□□ 0.08
NUP50-218ENST00000493456 PPCDCQ96CD2 204 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 INPP5KQ9BT40 448 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 REEP4Q9H6H4 257 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 CHODLQ9H9P2 273 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 GIN1Q9NXP7 522 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 EMC3Q9P0I2 261 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 SLC25A15Q9Y619 301 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 PMF1-BGLAPU3KQ54 211 aa15.56■□□□□ 0.08
NUP50-218ENST00000493456 A0A1W2PNR3 127 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 NPIPB8E9PQR5 432 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 NDUFS8O00217 210 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 ETV2O00321 342 aaPredicted RBP15.55■□□□□ 0.08
NUP50-218ENST00000493456 CRCPO75575 148 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 RAD51DO75771 328 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 ZNF83P51522 516 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 SRSF2Q01130 221 aaKnown RBP15.55■□□□□ 0.08
NUP50-218ENST00000493456 CHRNB3Q05901 458 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 SQLEQ14534 574 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 KIAA0040Q15053 153 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 TOMM34Q15785 309 aaPredicted RBP15.55■□□□□ 0.08
NUP50-218ENST00000493456 KLHL26Q53HC5 615 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 ZNF385BQ569K4 471 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 FBXW9Q5XUX1 488 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 LRIG3Q6UXM1 1119 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 B3GLCTQ6Y288 498 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 OR52N5Q8NH56 324 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 CCDC126Q96EE4 140 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 OTUB1Q96FW1 271 aaPredicted RBP15.55■□□□□ 0.08
NUP50-218ENST00000493456 C16orf58Q96GQ5 468 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 CCT7Q99832 543 aa15.55■□□□□ 0.08
NUP50-218ENST00000493456 A0A087WUV0 522 aaPredicted RBP15.54■□□□□ 0.08
NUP50-218ENST00000493456 LOC100289279A0A1B0GTE1 492 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 CIB4A0PJX0 185 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 C9JVG2 144 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 GTPBP1O00178 669 aaKnown RBP15.54■□□□□ 0.08
NUP50-218ENST00000493456 OIP5O43482 229 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 SEC22BO75396 215 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 PDE7AQ13946 482 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 IL17RELQ6ZVW7 336 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 UBE2J2Q8N2K1 259 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 CCNYL1Q8N7R7 359 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 TOR1AIP2Q8NFQ8 470 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 CDS1Q92903 461 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 ZNF775Q96BV0 537 aaPredicted RBP15.54■□□□□ 0.08
NUP50-218ENST00000493456 FAM120BQ96EK7 910 aaKnown RBP15.54■□□□□ 0.08
NUP50-218ENST00000493456 CHMP6Q96FZ7 201 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 OR5B2Q96R09 309 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 PIGUQ9H490 435 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 ZCCHC3Q9NUD5 404 aaKnown RBP15.54■□□□□ 0.08
NUP50-218ENST00000493456 C1orf109Q9NX04 203 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 SH3BP4Q9P0V3 963 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 FKBP7Q9Y680 259 aa15.54■□□□□ 0.08
NUP50-218ENST00000493456 IGKV3D-15A0A087WSY6 115 aa15.53■□□□□ 0.08
NUP50-218ENST00000493456 EXOC1LA0A1B0GW35 172 aa15.53■□□□□ 0.08
NUP50-218ENST00000493456 SLC35F4A4IF30 521 aa15.53■□□□□ 0.08
NUP50-218ENST00000493456 CCT8L1PA6NM43 557 aa15.53■□□□□ 0.08
NUP50-218ENST00000493456 VWC2LB2RUY7 222 aa15.53■□□□□ 0.08
NUP50-218ENST00000493456 GSTA1P08263 222 aa15.53■□□□□ 0.08
NUP50-218ENST00000493456 DDX5P17844 614 aaKnown RBP15.53■□□□□ 0.08
NUP50-218ENST00000493456 PDLIM4P50479 330 aa15.53■□□□□ 0.08
NUP50-218ENST00000493456 CSNK2A1P68400 391 aaPredicted RBP15.53■□□□□ 0.08
NUP50-218ENST00000493456 CHRNEQ04844 493 aa15.53■□□□□ 0.08
NUP50-218ENST00000493456 CBFBQ13951 182 aa15.53■□□□□ 0.08
NUP50-218ENST00000493456 LASP1Q14847 261 aaKnown RBP15.53■□□□□ 0.08
NUP50-218ENST00000493456 PDK3Q15120 406 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms