RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 NFAM1Q8NET5 270 aaPredicted RBP8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 OR2T33Q8NG76 320 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 OR4Q3Q8NH05 313 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 TMEM163Q8TC26 289 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 BRIX1Q8TDN6 353 aaKnown RBP8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 DNAJA4Q8WW22 397 aaPredicted RBP8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 ATOH1Q92858 354 aaPredicted RBP8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 TP53INP1Q96A56 240 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 C12orf43Q96C57 262 aaKnown RBP8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 BPIFA2Q96DR5 249 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 PLEKHA8Q96JA3 519 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 LRFN5Q96NI6 719 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 CCNL2Q96S94 520 aaPredicted RBP8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 ADOQ96SZ5 270 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 SPSB2Q99619 263 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 LPAR4Q99677 370 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 DOK1Q99704 481 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 ZNF426Q9BUY5 554 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 DPH1Q9BZG8 443 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 SEMA4CQ9C0C4 833 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 NRSN2Q9GZP1 204 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 WDR54Q9H977 334 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 AMBNQ9NP70 447 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 FBXO8Q9NRD0 319 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 IL20Q9NYY1 176 aa8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 RPL36Q9Y3U8 105 aaKnown RBP8.4□□□□□ -1.06
SMARCC1-208ENST00000492896 CPAMD8Q8IZJ3 1885 aa8.4□□□□□ -1.07
SMARCC1-208ENST00000492896 A0A1W2PQD3 144 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 IRGMA1A4Y4 181 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 CDC14CA4D256 554 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 SNTNA6NMZ2 147 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ENO4A6NNW6 628 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 H3BMQ9 156 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 CDC42EP2O14613 210 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 OIP5O43482 229 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 GALR2O43603 387 aaPredicted RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 TLX2O43763 284 aaPredicted RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 AHCYL1O43865 530 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 MAN1A2O60476 641 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 HCN1O60741 890 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 CNOT3O75175 753 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 TRMUO75648 421 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 RCBTB2O95199 551 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 HMGN1P05114 100 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 KLK3P07288 261 aaPredicted RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 NGFRP08138 427 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ADORA3P0DMS8 318 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 SAGP10523 405 aaPredicted RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 DBTP11182 482 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 CCL4P13236 92 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ZNF28P17035 718 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 MAKP20794 623 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ENDOUP21128 410 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ABCD3P28288 659 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 GRK5P34947 590 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 PEX19P40855 299 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 SLC15A1P46059 708 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ST13P50502 369 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 PNLIPRP2P54317 469 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 NRG3P56975 720 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 RNF4P78317 190 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ST3GAL4Q11206 333 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 SKP2Q13309 424 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 EFR3AQ14156 821 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 IRF3Q14653 427 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 SYT14P1Q58G82 188 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 SLC25A30Q5SVS4 291 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 WBP2NLQ6ICG8 309 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 LCN10Q6JVE6 187 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 SLC30A6Q6NXT4 461 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 MRPL14Q6P1L8 145 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 TMEM205Q6UW68 189 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 FAM198BQ6UWH4 519 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 HSDL2Q6YN16 418 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 TMPRSS11FQ6ZWK6 438 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ZNF367Q7RTV3 350 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 CPEB2Q7Z5Q1 589 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ERI1Q8IV48 349 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 NAXDQ8IW45 347 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 SLC43A2Q8N370 569 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 OR13C2Q8NGS9 318 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 NUBPLQ8TB37 319 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 MR1Q95460 341 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 SAMD8Q96LT4 415 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 COG8Q96MW5 612 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ZNF582Q96NG8 517 aaPredicted RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 WDR77Q9BQA1 342 aaPredicted RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 TBL1XR1Q9BZK7 514 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 STRADBQ9C0K7 418 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 LAT2Q9GZY6 243 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 OR52D1Q9H346 318 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ATP13A2Q9NQ11 1180 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 C20orf141Q9NUB4 165 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 MED17Q9NVC6 651 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 SLC39A1Q9NY26 324 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 ENPP5Q9UJA9 477 aa8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 PPIEQ9UNP9 301 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-208ENST00000492896 USP34Q70CQ2 3546 aa8.38□□□□□ -1.07
SMARCC1-208ENST00000492896 A0A087WUJ7 227 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms